Clostridium scindens: HDCHBGLK_01184
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Entry
HDCHBGLK_01184 CDS
T06591
Symbol
serS
Name
(GenBank) Serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
csci
Clostridium scindens
Pathway
csci00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
csci00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HDCHBGLK_01184 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
csci01007
]
HDCHBGLK_01184 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csci03016
]
HDCHBGLK_01184 (serS)
Enzymes [BR:
csci01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
HDCHBGLK_01184 (serS)
Amino acid related enzymes [BR:
csci01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
HDCHBGLK_01184 (serS)
Transfer RNA biogenesis [BR:
csci03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
HDCHBGLK_01184 (serS)
Prokaryotic type
HDCHBGLK_01184 (serS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
DUF4164
CCDC93_CC
Prefoldin_2
DUF2229
DUF7491
Laminin_II
HAUS6_N
LIN9_C
XRCC4_CC
FapA
Motif
Other DBs
NCBI-ProteinID:
QBF73808
UniProt:
B0NEN3
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All DBs
Position
complement(1157742..1159028)
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AA seq
428 aa
AA seq
DB search
MLDIKFVRMNPDVVKENIKKKFQDEKLPLVDEVLELDKRNRDIKQEVEALRADRNKISKE
IGACMAQGKKDEAEELKKKVQENADRLESLSTEEKDVEAKIKKIMMTIPNIIDPSVPIGK
DDNENVEIEKFGEPVVPDFEIPYHTEIMESFSGIDLESAGRVAGNGFYYLMGDIARLHSA
VLSYARDFMIGRGFTYCIPPFMIRSNVVTGVMSFAEMDAMMYKIEGEDLYLIGTSEHSMI
GKFIDTMLTEDQLPQTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEESKM
WYDKLWQNTVDLFRSMDIPVRTLECCSGDLADLKVKSCDVEAWSPRQKKYFEVGSCSNLG
DAQARRLGIRVKGEDSKYFAHTLNNTVAAPPRMLIAFLENNLQADGSVKIPEVLQPYMGG
TTRLIPKK
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgttagacattaaatttgtaagaatgaatcctgatgtagtaaaggaaaatattaaaaag
aaatttcaggatgaaaaactgccattagttgacgaagtgctggaattggataagagaaac
agggatattaagcaggaagtagaagcgcttcgtgctgacaggaataagatttctaaggaa
atcggcgcatgcatggcacagggaaagaaagatgaggcagaagaattaaagaaaaaggtt
caggagaatgctgacagattagaatctctttccacagaagaaaaggacgttgaagcaaag
attaagaagatcatgatgacgattccgaatatcattgatccttccgtaccaattggaaaa
gacgacaacgaaaatgttgaaatagagaagtttggcgagccggtggtaccagatttcgag
attccataccatacagaaatcatggaaagttttagcggaatcgatcttgagagtgcagga
agggttgcgggaaatggcttttactatctgatgggagatattgcaaggcttcattctgct
gtgctgtcttatgcacgcgactttatgattggccgcggatttacctactgtattccgcca
ttcatgatccgcagcaatgtagttaccggtgttatgagttttgccgaaatggatgccatg
atgtataagattgaaggagaagacttatatctgatcggaacaagcgagcattccatgatt
ggaaaattcattgatactatgcttacagaagaccagcttccacagacactaaccagttat
tctccatgcttccgtaaggagaaaggcgctcatggaatcgaggaacgtggagtatataga
attcaccagtttgaaaaacaggaaatgatagttgtctgcaagccggaagaaagcaagatg
tggtacgataaattatggcagaatacggtagatctgttccgttcaatggatattcctgta
cgtactcttgagtgctgctccggtgacctggcagatctgaaagtaaaatcttgcgatgta
gaagcatggtccccaagacagaagaaatattttgaggtgggaagctgctctaatctcggg
gatgcccaggcaagaagacttggaatccgcgtaaaaggcgaggatagcaaatatttcgca
catacgctgaataatacggtagctgcgcctccgagaatgctgatagcattccttgaaaat
aatcttcaggcagatggatccgttaagattccggaagttttacagccatatatgggtgga
actacaagactcatacctaaaaaataa
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