Clostridium scindens: HDCHBGLK_01272
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Entry
HDCHBGLK_01272 CDS
T06591
Symbol
ypdA_1
Name
(GenBank) Sensor histidine kinase YpdA
KO
K07718
two-component system, sensor histidine kinase YesM [EC:
2.7.13.3
]
Organism
csci
Clostridium scindens
Pathway
csci02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
csci00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HDCHBGLK_01272 (ypdA_1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
csci01001
]
HDCHBGLK_01272 (ypdA_1)
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
csci02022
]
HDCHBGLK_01272 (ypdA_1)
Enzymes [BR:
csci01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
HDCHBGLK_01272 (ypdA_1)
Protein kinases [BR:
csci01001
]
Histidine kinases
Other
HDCHBGLK_01272 (ypdA_1)
Two-component system [BR:
csci02022
]
Other families
YesM-YesN
HDCHBGLK_01272 (ypdA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
His_kinase
HATPase_c
dCache_1
UspB
DUF2207_C
SLATT_6
Motif
Other DBs
NCBI-ProteinID:
QBF73883
UniProt:
B0NES5
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All DBs
Position
complement(1242934..1244718)
Genome browser
AA seq
594 aa
AA seq
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MLRSKKSFISKITNSQLSTKIVCIILIVVFLMISASVSGILLVLNSSNKLLYQALAGSLT
YSSQDISKKLSNIESMTSAVVSNSNIRKNLITLAEEDPDIRIKNAENSLNTLIADYYQTY
KDNNISYINLYHAQGATQSYEARSSQVPDAVHQNVVKAANNNSGYPYWVTDYCNSYGLFL
GRECRRVDQMNFQTLGTVVVGVDMDRLVRSSTNSVLHSDETQYILFDTDTEFYHSESLDS
DEINTIGKKLKTDYGVISVNAGKYFAVKGSIGNTSWNYICLVPYGHISATLNFTKLMALV
VILVSVLISLLLSRMLIRSVTSDFSRLIQKMKAFGRDESTPPDTGYDYSGRTDEVGVLHN
QFDHMALKIQNLIQENYVNEILSKDARLKALENQINPHFLYNTLEAVNWRAKAIGEKDIS
SMVESLGTLMRETLNTKDKTFTVRRELEIVKSYLTIQQIRFEDRLEYTKQIDDSIMDISL
PHLTIQPLVENAINYAMEESTEVCHIQIEGTRSGDYVYIDVVNNDSQFEQDLLRKLDQGL
VTPHGFGIGLLNIHKRIQLTYGSEYGLHLFNKDDEHAVARIIIPGGEHVKTTDC
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgctaagaagtaaaaaatcttttatcagtaaaatcacaaattcccagttgagcacaaag
atcgtatgtatcattttaattgttgtgttcttaatgatatccgcttcggtcagtggtata
ctgctggtcttaaattccagtaataaactgctgtaccaggctcttgcgggttcactcaca
tatagttcccaggatatatcaaaaaagctgtcaaacatcgaatctatgacaagcgcggtc
gtctccaactctaacataagaaaaaacctgatcactctggcagaagaagatcctgatatc
cgtataaaaaatgctgagaattcactaaacacattgattgcagattattatcagacgtat
aaagataacaatattagttacattaatctatatcatgcacagggtgcaacccaaagctat
gaggccagaagttctcaagtgccggatgcggtccaccaaaatgtggttaaagctgctaat
aacaactccggatatccatactgggttacagattactgcaattcctacgggctctttctt
ggacgtgaatgccgcagggttgaccagatgaatttccagacattaggtacggttgtcgta
ggcgtagacatggaccgtctggtacgttcttctaccaactctgtcctgcattcagatgaa
acacaatatatattatttgacacagatacagagttttaccactcagaaagtctggattcc
gacgagatcaacacaattggaaagaagctgaagaccgactatggtgtgatttctgtaaat
gctggtaaatattttgcagtgaaaggctccattgggaacacgtcctggaattatatctgc
cttgtcccatacggacatatatcagctacattaaactttacaaaactcatggcactggtg
gtaatccttgtttctgttctcatttccctcttgctgtccaggatgctcatccgttctgta
accagcgatttcagtcggcttatccaaaaaatgaaggccttcggaagagatgaatccacg
cctccggatacaggatacgattatagcgggcgcacagatgaggtcggggtactgcacaac
cagtttgaccatatggccttaaagatacagaatctaatccaggagaactatgtaaatgaa
attctttcgaaagatgcccgtttaaaggcattagaaaaccagatcaaccctcattttctt
tacaatacactggaggctgtcaactggcgcgcaaaagctatcggtgaaaaagatatatca
tccatggtagagtcgctgggcacacttatgcgggaaaccttaaatacaaaagataagacc
tttacggtccgccgtgaactcgaaattgttaaaagctacctgaccatacagcagatccgt
tttgaagaccgccttgaatatacaaagcaaatagatgactctatcatggatatcagtctg
ccccacctgaccatacagccccttgtggaaaatgcaatcaactatgcgatggaagaaagc
acggaagtgtgccatatccagattgaaggtacccgttccggggattacgtatatatagat
gtggtcaataatgattcccagtttgaacaagatttgttaagaaagcttgatcaggggctg
gtaaccccccatggattcgggatcggcctgctcaatatccacaagcgcatccagctcacg
tacggttcagagtacggacttcatctatttaataaagacgacgagcatgcagtagccaga
attattataccaggaggagaacatgttaaaactactgattgttga
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