Clostridium scindens: HDCHBGLK_01338
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Entry
HDCHBGLK_01338 CDS
T06591
Symbol
cpdA_1
Name
(GenBank) 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA
Organism
csci
Clostridium scindens
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
Big_2
Pur_ac_phosph_N
Metallophos_2
Ig_NUP210_5th
PhoD_N
Motif
Other DBs
NCBI-ProteinID:
QBF73945
UniProt:
A0A494WIH2
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All DBs
Position
1311363..1316891
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AA seq
1842 aa
AA seq
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MFKLGKRVCAGIMAAVTLGVTLLPGVESYAAAEDLTENLKICVISDTHYYPLNYVSDCED
YKTYVGGDPKMLAESGAILDSALDMIKTDQPHLVLVSGDLTKDGEKLGHQNMAKKLQTIE
DKTDAEVFVINGNHDIYNYQDSCTFENGKKEQATTTTPAEFKEIYGQFGYNGEYDAQYYT
PPTGKQAGGLSYSVTVGDYVIIGIDSGRYSPDADTGMDTNEHITAGRIDTSLLPWVEQQV
KDANAKGKTVIGLMHHGLVPHFSKEAELLSEYVVDDWQEMASTLADAGMRYIFTGHMHAN
DIAEYTSVKGNKIYDLETGSLAAYGSPVRTVTIQRDQTMTDQSTLQLDETFHVKSTSVKS
INYNGATIDDLQAYTMNKLYPETLFNNMAGGMLKPMIQDVADTGIRNYLAEEMPELDIDT
IVLDTVREMLAGGMNLELGSGIGRVAVSYRNGGIELKPTGTAGLIGTTTISDAQIIRVVD
DLLAKVENQYLKNPDYLLGKVNEIVTKVSQFGVGSLDGQEKTLYDFIVLLLTSHYAGGEN
PPAWVTEQALPYLRSGAVIKDLMDMLVGDVVVIVNDIAANLNIDTGIAFSGLWKTAIDSQ
TNNGNLATILKQFNLNVEELINGLISEYMSDSFLTGMGGLLDNYASSFLYDTESPDDILN
DENGRTITWSTSTPVTPQEPSVANGLAPTQIAMTQGESADSRYLRWYTGAGVSGTAVAQI
SESGDFADAATFTAETQEVVKPKTLLNLGLMATYTTQKARKYTAKITGLETGKTYYYRVG
ISETGNFSTPVAFTVKNEETSGFTFINVNDSQGMIASDYETYLNTLAEAKSQFAGAAFVL
HAGDFVDDGSNEDYWTWALEGVSEAVSYIPSAGNHEAKSSVEGITDPNAIISHFQVQNQD
IPNQDTSTGIYYSYEYENATFIVLNTNDVTDDGYLSDAQYDWAYEKAENAQTDWKIILMH
KSPYSNGPHAKDADVVAIRKQLNNLAADCDVDLVMSGHDHVYNRTPYLAQGKTQQVTTRT
TSYQGNNYTTAVNPSGTVFVIAGTAGVKNYVQTPVSTVPSEKTFQQTCPVYAGVTIDDGK
LYYRAYQVKDGVSQLVDSFAIDKSKETEVPEWKKVEDMIAELPDTPTLDDASEIQAARAA
YNALSDADKAQVANVKRLEQAEKMLRALQSINGKQTRHVNSKSEFLNALKDTNVGTIITD
GATIEFEDEYWWGGAYDNVWEITRDLRIMGSSKLTYVTFRVKNGATLILDGDIAIDDTRA
QGSGYASLNPVEVYGNSTLITSGHVALRTEYGTGGENEGVCVKMMENGSKAILGSDGSYY
GAEAAVLSIGSGTEVIINAGTYARKNNNHRAVDSRGTIEVNGGEIANLWSNGALYINGGT
FDNGSNLNPQIPVDIEGTAYMTGGRITPYNGNGVKLRSTGKLHILTGSIGQASIGNVQPY
VGAVTTQNYKDIEVGYHNINGSGNSDGIYEASAAAGTVESLANANGTKLAGSAVADGRMT
GTLGEGDHHVYGKYYLAGGGKTAATGFSVDSGGEAIVYGPSRFIENYRVTDAVIEGEATR
LVQYQDGAVIRLNGYTLPANAFDNAVSWTSDNAQVATVDRGKVTLKKTGTANITMTSQSN
ASISDQVKIMAVDPVINGEELIEDDAPQTYTVDLQATGIDETDRNRISYKWSVDDLKVAT
IDETTGELTKVGQGTVHVTAQLLLDGVATDIRVSKEVQVRDVISVEITWGAMEYTYDDGQ
WNKDTHQYDGRGWTADTSEGDQIQVKNTGKEAVAARFAYLAEEGYTSIDGRFVKDNSPIT
ADTLQPQEKMKVQLQLNNKPDKKMDKTTVGTVTITINRESTN
NT seq
5529 nt
NT seq
+upstream
nt +downstream
nt
atgtttaagttagggaagagagtatgtgcggggataatggcagcagttacccttggcgtg
acattattaccgggagtggagtcttacgcagcagcagaagatctaacagaaaatctgaag
atatgtgttatatccgacacacattactatccgcttaattatgtcagtgattgtgaagac
tataagacatacgtaggcggagatcctaagatgctggcagaatccggagctattctggat
tctgcacttgatatgattaagacagatcagccgcatctggttcttgtatccggagatctt
accaaagacggagaaaaactgggacaccagaacatggcgaagaaattgcagacgatcgaa
gataagacggatgcagaagtatttgttatcaatggaaatcatgacatctataattatcag
gattcctgcacatttgaaaatggtaagaaagaacaggcaacgaccacgactccggcagaa
ttcaaagagatctatggtcagtttggatataacggagaatatgatgcacagtattacaca
cctccgacaggaaaacaggcaggcggtctgtcttattccgtaacagtcggggattatgta
atcatcggaatcgattccggcagatatagtccggatgccgataccggaatggataccaac
gaacatattactgcaggacgaatcgacacatctcttcttccatgggttgaacaacaggtg
aaagatgcgaatgcaaagggaaagacagttatcggactgatgcatcacggattggtacca
cacttttctaaggaagcagaactgttaagcgagtatgtagtagacgattggcaggagatg
gcatctacactggcagatgcaggaatgcgttacatatttaccggacatatgcatgcgaat
gatatcgcagagtacacatctgtaaaaggcaataagatctatgaccttgagacgggttcc
ctggcagcctatggttctccggtacgtacggtgacgattcagagagatcagacgatgact
gaccagtcaacacttcagttagatgagacgtttcatgtgaaaagcaccagtgtgaagtcg
atcaactataacggagcgaccattgatgatctgcaggcatataccatgaacaagttatat
ccggagacgctgtttaacaatatggctggcggaatgttaaagccgatgattcaggatgtt
gcagatacgggaatccggaactatcttgcggaggaaatgccggagttagatatagatact
attgtactggatactgtgcgagagatgttggcagggggaatgaatctggaactgggttca
ggtatcggtcgtgttgcagtcagctatcgaaacggaggaattgagctgaaacctacggga
acagcaggactcattggaacaaccacgatcagtgatgcacagattatccgggtggtagac
gatcttctggcaaaggtggagaaccagtacctgaagaatccggattatctgttaggaaaa
gtaaatgagattgttaccaaggtttcccaattcggtgtgggttctttggatggtcaggaa
aagacattatatgactttatcgtattgcttctgacaagccattatgctggtggtgagaat
ccaccggcatgggtgaccgaacaggcactcccatatctcagaagcggggcagtcattaaa
gacctgatggatatgctggttggagacgtcgtagtgatcgtaaatgatatagcagccaat
ctgaatattgataccggaattgcctttagtggcctgtggaagactgcaattgattctcag
acgaataatggtaaccttgctactatactgaaacaattcaatctgaatgtagaagagttg
ataaacggattaatatccgaatacatgagtgacagtttcctgacgggaatgggtggtctg
ttggataattatgcttcgtctttcctatatgatacagaaagcccggatgacattctgaac
gatgaaaatggacggacgatcacctggtctacatcgacaccggtgactccgcaggaacca
tctgtggcaaacggactggcaccgacgcagattgccatgacccagggagaatcggcagac
tcgaggtacctgcgctggtacacaggggctggagtgtcagggactgctgtggcacagatc
tcagagagtggagattttgcggatgcagctacatttacggcagagactcaggaagttgtg
aagccgaagacattgttgaatctgggactgatggcaacttataccacacagaaagcacgc
aaatacacagcgaagattacaggacttgagaccggtaagacttactattacagggttggt
ataagcgagacaggcaatttcagcacaccggtggcatttacagtaaagaatgaagaaaca
tcagggttcacatttattaatgtgaatgattcacagggaatgattgcatcggattatgag
acatatctgaatacgctggcagaagctaagagtcagtttgctggagcagcatttgttctt
catgcaggagattttgtagatgatggaagcaatgaggattactggacatgggcgctggaa
ggagtatctgaggctgtatcttatatcccttctgcaggaaatcatgaagcgaagtccagt
gtagaaggaattacggacccgaacgctattatctcacattttcaggtacaaaatcaagac
attccgaatcaggatacaagtaccggaatctattattcttatgagtatgaaaatgcaaca
tttatcgtgctgaatacgaatgatgtaacagatgacggatacctgtctgatgcacagtat
gactgggcttatgaaaaggcagagaatgcacagacggactggaagatcatcctgatgcat
aagtcaccatattccaatggcccgcatgccaaagatgccgatgtggtagcaatccgtaag
cagttaaataacctggcggcggattgtgatgtggatctggttatgtccggtcatgatcat
gtatataaccgtactccgtatcttgcgcagggcaagacacagcaggtgactaccaggaca
acctcttatcagggaaataattatactactgccgtgaatccgtccggaacggtgttcgtg
atcgccgggacggcaggagtgaagaattatgttcagactccagtatctaccgtaccgagt
gagaagacatttcagcagacttgccctgtgtatgcaggtgttacgattgatgatgggaaa
ctatattacagagcttaccaggtgaaagatggtgtgtctcaactggtagattcctttgcc
attgataaatcaaaagagacagaggttccggagtggaagaaagttgaggatatgatagct
gagctcccggatacccctacattggatgatgcatctgagatccaggcggcaagagcggcg
tacaatgccctgagcgatgctgataaggcacaggtggctaatgtgaaacgtctcgagcag
gcagagaagatgctgcgggcattacagagtattaatggaaaacagaccaggcatgtaaat
agcaagtcagaatttctgaatgcactgaaggatacgaatgtgggaacgatcataacggat
ggtgctacgattgagtttgaagacgaatactggtggggcggtgcgtatgataatgtttgg
gaaattaccagagacctgcgtattatgggaagctccaagttgacgtatgttactttccgg
gtaaagaacggagccacactgatactggatggagatatcgcgatcgatgatacgagagca
caggggtctggatatgcgtccttgaatccggtggaagtatatgggaactctacgctgatc
acaagtggacatgtagcgttgcgtaccgaatatggaacaggcggagaaaacgaaggtgtc
tgcgtgaagatgatggagaatggaagcaaggcaatccttggaagtgacggaagttactat
ggagcggaagcggccgtattgtctataggatcgggtacagaagttatcatcaatgccggt
acttacgcaaggaagaataacaatcatcgtgcggtggactcccggggaacgattgaagtg
aatggcggagagatcgcgaatctctggagcaatggtgctctatatatcaatggcggaacc
ttcgataatggaagtaatctgaatccacagattccggtagatatagaggggactgcatat
atgaccggtggaaggatcacaccatataatgggaatggtgtgaagcttagaagtaccgga
aaactgcatatcctgacaggcagtatcggacaggcatccatcggaaatgtacagccatat
gtaggcgcggtgacaactcagaattacaaagatattgaggtgggctaccacaatattaac
ggaagcggaaacagcgacggcatctacgaggcatccgcagcggccggtacggtggaaagt
ctggcgaatgcaaacggaacgaagcttgccggaagcgccgtcgcagatggaaggatgacg
ggtacactgggagaaggcgaccatcatgtatatggaaaatattatcttgccggcggaggt
aagacagcggcaaccggattcagtgtagacagtggcggagaagcgattgtgtatggtccg
tcaagatttatcgagaactatcgggtgacggacgcagtgattgagggagaagcgaccaga
ctggtacagtatcaggacggcgccgtaattaggttaaacggttatacccttcctgccaat
gcattcgataatgcagtgagctggacgtcggataatgcacaggtggcaactgtagaccgc
ggaaaagtcacattgaagaagaccggtacggccaatattaccatgacgtcccagtccaat
gccagcatctctgatcaggtgaagataatggcagtagatccggtgatcaatggagaggag
cttatcgaagatgacgcaccgcaaacctataccgtggatttgcaagcgacaggtatcgat
gagacggatcggaacagaatcagttacaaatggtccgtggatgacttaaaggttgcgacg
atagacgaaacaacaggagaacttacaaaagtcggacagggaacggtgcatgtgacagca
cagcttctgttagacggtgtggctacggatatcagagtcagcaaggaagtgcaggttcgg
gatgttatatcagtggaaatcacatggggcgctatggaatatacctatgatgatggacag
tggaataaggatacgcatcagtatgatggaagaggatggactgcagacacaagtgaagga
gatcagattcaggtaaagaatacaggaaaagaagctgtggcagcaagatttgcatatctt
gcggaagaaggttatacatctatagatggacgttttgtaaaagataatagcccgattaca
gcagacacacttcagccacaagaaaagatgaaggtacagcttcagcttaataataagccg
gataagaagatggataaaacgacagtaggaactgtcacaatcacaatcaatcgggagagt
acgaattaa
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integrated database retrieval system
