Clostridium scindens: HDCHBGLK_01411
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Entry
HDCHBGLK_01411 CDS
T06591
Name
(GenBank) hypothetical protein
KO
K12257
SecD/SecF fusion protein
Organism
csci
Clostridium scindens
Pathway
csci02024
Quorum sensing
csci03060
Protein export
csci03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
csci00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
HDCHBGLK_01411
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HDCHBGLK_01411
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HDCHBGLK_01411
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
csci02044
]
HDCHBGLK_01411
Secretion system [BR:
csci02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
HDCHBGLK_01411
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
ACR_tran
SecD_1st
Motif
Other DBs
NCBI-ProteinID:
QBF74015
UniProt:
B0NI40
LinkDB
All DBs
Position
1390739..1392916
Genome browser
AA seq
725 aa
AA seq
DB search
MKNKKLNIWIALGVIFLFVYLAVFGCGGGIKGMRDMRFGIDIRGGVEAVFEPAGTKEKPT
KAELEMAREVIETRLDAQNILDREVTVDEKAGNIIVRFPWKSDEKDFDPETAIQELGQMA
ELTFRGPDGTVYVKGSDVARSRAALDEQKRNIVELEFTSKGAEKFANATEELAGQNMGIY
MDEEMISNPLVNGKITGGKAEITGMASKEESQDLADKINSGALPFSMETTNYNTISPTLG
DRALNAMAAAAGITMVLICLFMVAWYRLPGIISCLTLAFQIALQILAISVPQYTITLPGI
AGLILSGGMAVDANIIISERISEELKKGSSVKRAIKSGYQRAFSSVLDGNITTAAVAGIL
MIFGSGTMLSFGYTLLTGVIINLLAGVWMSRSMLNSIIRYGFFNQGKWFCKKRDKKVLHF
TEAKRYFFLASIAVIVSGTIWSAANGVKLDTQFTGGVILKYTYSGKADTGQIQQKVEDIA
DRSVSVQTSEDPSTGEKKLVLTLAGKNGLSPDQQKQILNTLNKGNDNRFQTSETYAVEPY
IGAKALKNSVIAIILSFLFIIVYIRLRFSALGGLAAGVTAVLALMHDICIVLFVFGIFRI
PLNDAFVAVTLTIIGYSINDTIVLYDRIREHRNTMKRKGTLAELVDLSTTETLGRSINTA
FTVILCAFIILAASIVYQMESITKFSLPLLAGLVSGCYSSICIAAPLWVWWEEQVQKRKT
GMKRK
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgaagaataaaaaattaaatatttggattgctcttggggtaatctttctttttgtgtac
ctcgcagtcttcggctgtgggggcggcatcaagggaatgcgcgacatgcgctttggcatt
gatatccgaggcggcgtggaggccgtatttgagccggcaggaacgaaggaaaaaccgaca
aaggcagaactggaaatggcaagggaagtcatcgagacccggctggatgcccagaatatt
ctggaccgggaggtgacggtggatgaaaaggcaggcaacatcatcgtcagattcccatgg
aaatccgatgaaaaggactttgacccggaaaccgccatccaggaattaggccagatggca
gagttaacgttccgtgggcctgacggcaccgtgtatgtgaaaggctcggatgtagccaga
agccgggcggcgctggatgagcagaagagaaacatcgtggaactggagtttaccagcaag
ggtgcggaaaaatttgccaatgccacggaggaactggcaggacagaatatgggaatctac
atggatgaggagatgatttccaatccgctggtgaatgggaagatcacaggcgggaaggct
gagatcacagggatggcctccaaggaggagagccaggatctcgcggataagattaattcc
ggggcgctgccgttctccatggagacgacgaattacaataccatcagtcctacgcttgga
gaccgggcgctgaatgcgatggcggcagcggcagggatcacgatggttctgatctgcctc
tttatggttgcgtggtaccggcttccgggcatcattagctgcctgacgctggcctttcag
atcgcgctgcagatcctggccatctcggtgccgcagtatacgatcacccttccgggcatc
gcagggctgatactgtcgggaggcatggctgtagacgccaacatcattatcagtgagagg
atcagcgaggaattgaagaaagggagttccgtgaaacgagcgataaagagcgggtaccaa
agggcattttcttctgttctggacggaaatatcacgacggcggctgtggcgggcattttg
atgatatttggctctggcacgatgctaagcttcggatatacgctgctgaccggcgtgatc
atcaatctgctggcaggcgtgtggatgtccagaagcatgctgaattctataatccggtac
ggcttttttaaccaggggaagtggttttgcaaaaagcgtgataagaaggtgctgcacttt
actgaggcaaagcggtatttctttttggcaagtattgctgttattgtctctggaaccata
tggagcgcggcaaatggcgtgaagctggatacccagtttactggaggcgtcattttaaaa
tatacctactccgggaaggcggataccggacagatacaacagaaagtggaggatatcgca
gacagaagcgtcagcgtccagacatcggaagatccctctacaggggagaagaaactggta
ctgacgctggcgggaaagaacgggctgtctccggatcagcagaagcagattctcaatacg
ctgaataaaggaaatgataaccggtttcagacttccgagacgtatgcggtggaaccctat
atcggagcaaaggcactgaagaattccgtcatagcgatcatactttcttttctttttatt
attgtatatatccgcctgcgcttttctgcacttggaggactggcagccggggttacggcg
gttctggcgcttatgcatgatatctgcatcgtgctgttcgtattcgggatattccggata
ccgctgaatgatgcgtttgtggcagtgacgctgacgattatcgggtattccatcaatgat
acgatcgtattgtatgatcggatccgcgagcacaggaatacgatgaaaaggaaaggaact
ctggcggaactggtggatcttagcacgacggaaactctgggacggtcgatcaacacggca
tttaccgtgatcctatgtgcatttattattctggctgcctcgatcgtctaccagatggag
tctatcacgaagttctccctcccgcttcttgcagggctggtatcgggatgctattcgtca
atctgcatcgccgcgcctctgtgggtatggtgggaagaacaggttcaaaagcggaagaca
gggatgaaaaggaaatga
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