Clostridium scindens: HDCHBGLK_01649
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Entry
HDCHBGLK_01649 CDS
T06591
Symbol
pbp
Name
(GenBank) Beta-lactam-inducible penicillin-binding protein
KO
K21467
penicillin-binding protein 3
Organism
csci
Clostridium scindens
Brite
KEGG Orthology (KO) [BR:
csci00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
csci01011
]
HDCHBGLK_01649 (pbp)
Peptidoglycan biosynthesis and degradation proteins [BR:
csci01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
HDCHBGLK_01649 (pbp)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
MecA_N
Motif
Other DBs
NCBI-ProteinID:
QBF74252
UniProt:
B0NK31
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Position
1610884..1612932
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AA seq
682 aa
AA seq
DB search
MKRKKIIGTMAAILILLIVGAVAVVLVRRPFDAGKPDELLADYFACIEKGAYDKMYGMLD
EESKANISKKDFVTRNQKIYEGIEAKNVKISVKDAKKADGGEKVSYLASMDSVAGKIEFE
NQAMCTRDSYFDEFKLSWDDSLIFPDMKDTDKVSVSTSQAVRGQILDRNGNMLAGPGTAP
SVGLVPGKMSENKEADIAQLAGLLGMTEEEINSQLSAAWVTPDSFVPLKTLNSQQSQELT
EQLLTIAGVLINDTEVRTYPLGEKAAHLIGYVQSVTAEDLEEHKGEGYTSSSVIGKSGIE
GLYEKELKGENGVKISIMTEDGVEKNVVASVDKQDGENIRLTIDSDLQGLVYDQFREDKS
CSVAMNPFTGEVLALVSTPAYDDNEFILGMSGERWDQLNNDENKPLYNRFRQVWCPGSSF
KPITAGIGLTTGTINPEEDYGSEGLSWQKDESWGDYHVTTLHEYSPVNLENALIYSDNIY
FAKAALNIGADNLMKSLKLLGFGQELPFEIKMSQSQYANDGGTIDSEIQLADSGYGQGQI
LINPLHLATLYTSILNDGNVIRPYLTYSETPKSEVWISQAFSSDAASRVKTALEKVVNTP
EGTGYGAHREDIALAGKTGTAEIKADQNDTTGTELGWFGVFTEDAAAQKPVLLMSMVEDV
KDRGGSGYVVDKSAAILQGYLP
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtaaaaagattataggaacaatggccgcgatactgatcctgctgatcgtagga
gccgtggcagtcgtgctggtaagaaggccctttgatgcgggaaagccggatgaactgctg
gctgattattttgcatgtattgaaaaaggcgcttatgacaagatgtatggcatgctggat
gaggagagcaaggccaatatctctaaaaaagactttgttacccggaatcaaaaaatatac
gaaggtattgaagcaaagaatgtgaagatcagcgtaaaggatgcgaagaaggcggatgga
ggggagaaggtatcatacctggcatctatggacagcgtggcaggaaagatcgagtttgaa
aatcaggcgatgtgtaccagagactcctactttgatgagttcaaactctcctgggatgac
agcctgattttcccggatatgaaggatacggataaggtgtccgtatccaccagccaggcg
gtcagaggccagatactggaccgtaacggcaacatgctggcaggtcctggtacagcgccg
tccgtcgggctggtgccaggaaagatgtccgagaacaaagaagcggatatcgcccagctg
gccgggcttctgggaatgacagaagaggagattaacagccagttatcggcagcatgggtt
acgcctgactctttcgtgccattaaaaaccctgaacagccagcaaagccaggaattgacg
gagcagcttctgacgattgcaggggttctgatcaatgatacggaagtaaggacctatcct
ctgggagaaaaggcagcacatctgatcggctacgtgcagagcgtgacggcagaggatctg
gaagaacataaaggagaaggctataccagttcaagcgtcatcggcaagagcgggatcgaa
ggactgtatgagaaggaactcaaaggcgagaacggtgtcaagatctctattatgacggag
gatggtgtggaaaagaacgtagttgcatccgtggataagcaggatggagagaatatccgg
ctgaccattgattcggatctgcaagggctcgtctatgaccagttcagggaagataagagc
tgctcggtggccatgaacccgtttaccggagaagtgcttgcactggtcagcacgcctgct
tatgatgataatgaatttattcttggcatgtcaggcgagcgttgggatcagctgaacaat
gatgagaataagccgctgtataaccggttccgccaggtatggtgcccaggatcttccttc
aagccgatcacggcgggaattggccttaccacgggaaccatcaatccggaagaggactat
ggaagcgaggggcttagctggcagaaggatgagagttggggggattaccatgtaacgacg
cttcatgagtattctcctgtgaatctggaaaacgcgctgatttattcagacaacatctat
tttgccaaggctgccttaaatatcggtgcggacaatctgatgaagtcgctgaaactgctg
ggatttggccaggaactgccatttgagatcaagatgtcccaatcccagtacgccaacgac
gggggaaccatcgattctgagatacagctggcggacagcggctacgggcagggacagatt
cttatcaacccactgcaccttgccaccttatatacttccatcctcaatgacggcaatgtg
atccggccttatctcacctacagcgagacgccaaagagcgaagtatggatatcccaggcg
ttttcatccgacgcggcctccagagtgaagactgcgcttgaaaaggtggtcaataccccg
gaaggaaccgggtacggggcgcacagggaagatatcgcattggcgggcaagacgggaact
gccgagatcaaggcagaccagaacgatacgacgggcacggaacttggatggttcggcgta
tttacagaagatgccgccgcacagaagccagtacttcttatgagcatggtggaggatgta
aaggaccggggcggaagcggctacgtagtggataagagcgcggccatcctgcagggatat
cttccataa
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