Clostridium scindens: HDCHBGLK_01657
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Entry
HDCHBGLK_01657 CDS
T06591
Symbol
dapF_1
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
csci
Clostridium scindens
Pathway
csci00300
Lysine biosynthesis
csci00470
D-Amino acid metabolism
csci01100
Metabolic pathways
csci01110
Biosynthesis of secondary metabolites
csci01120
Microbial metabolism in diverse environments
csci01230
Biosynthesis of amino acids
Module
csci_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
csci00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HDCHBGLK_01657 (dapF_1)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HDCHBGLK_01657 (dapF_1)
Enzymes [BR:
csci01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
HDCHBGLK_01657 (dapF_1)
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Motif
Pfam:
DAP_epimerase
CntK_N
Motif
Other DBs
NCBI-ProteinID:
QBF74260
UniProt:
B0NK22
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All DBs
Position
1619040..1619873
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AA seq
277 aa
AA seq
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MRFTKMHGLGNDYVYVNCFKEKVEHPSEVARFVSDRHFGIGSDGLIMINPSKVADFEMEM
YNADGSRGEMCGNGIRCVAKYVYDYGLTDKTSISVETLGGIKYLDLTVKDGKVALVKVDM
GKPELKPERIPIVSDEERVVNEPIIVGGMEYRMTGVSMGNPHVVVYVKDLEGVKIEHVGP
KFENHERFPKRVNTEFTKVLDRKTVEMRVWERGSGETLACGTGACAVAVASILNGMTEDQ
VTVKLLGGDLLIEWDQEAGRVYMTGPATVVYDGEIAI
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgagatttacaaaaatgcatggtttggggaacgattatgtctatgtgaattgtttcaaa
gagaaggtggaacatccatccgaggtggccaggttcgtaagcgacagacactttgggatt
ggttcggatgggttgatcatgatcaatccatccaaagtagcggattttgagatggagatg
tataatgcggatggatccaggggggagatgtgcggcaacggcatccgctgcgtggcgaag
tatgtgtatgattatgggcttacggataagaccagcatatctgtggagaccctgggaggc
atcaaatatctggatcttaccgtcaaggatggcaaggtcgctcttgtaaaagtggatatg
ggaaaaccagaacttaagccggaacgaattcctatcgtatcagatgaagagcgcgtggtg
aacgagccgatcatcgtgggaggcatggaataccggatgaccggggtttccatgggcaat
ccccatgtagtcgtctatgtgaaggatcttgaaggagtgaaaatcgaacatgtaggcccc
aaattcgagaatcatgagaggttcccaaaaagagtcaatacggagttcaccaaggttctg
gaccgcaagaccgtagagatgcgcgtgtgggagagaggctccggcgagactctagcctgt
ggaaccggcgcctgcgcagtggcggtagccagcatattaaacgggatgacggaagaccag
gttaccgtgaagctgctgggcggagacctcttgatcgagtgggatcaggaggctggcaga
gtctatatgaccgggcccgccaccgttgtatacgacggggagattgcaatataa
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