Clostridium scindens: HDCHBGLK_01685
Help
Entry
HDCHBGLK_01685 CDS
T06591
Name
(GenBank) putative ABC transporter ATP-binding protein
KO
K18890
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
csci
Clostridium scindens
Pathway
csci02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
csci00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HDCHBGLK_01685
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csci02000
]
HDCHBGLK_01685
Transporters [BR:
csci02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
HDCHBGLK_01685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_22
DEAD
MMR_HSR1
nSTAND3
Sigma54_activat
RsgA_GTPase
AAA_16
AAA_29
AAA_30
TsaE
Motif
Other DBs
NCBI-ProteinID:
QBF74288
UniProt:
A0A494WM66
LinkDB
All DBs
Position
complement(1646649..1648301)
Genome browser
AA seq
550 aa
AA seq
DB search
MKVKKLGLIQVTQNVMKLNKLLSLGIIITVVGAVISALLPPLVLEQIINLLTSGSTVTIP
LAISYFVLLALTSILDSLRESLLVVFGQKITHGLRSTLCEKFSNLPADMFVKQEPGAVVS
RFVNDVDTVESLFTSGIISMFADACKVISIFAILFIKNKGLALVLLLLTPLIFLFTRMVQ
KRMLAAQIDNRIAVEKATNHVPETIKSIRTIHSLRKEKYMCEVYDKHIQDSYNAVEKTNF
YDAVYSPIILIINAFVVAVVMLLSATGVPGIQSFFGMSVGTAVAVINYISSIFGPLESIG
MEIQTIQSAVAGVHRIDEFLSLDERFETDENIDLNMLMESNRACVELQNVTFGYEPNSTI
LNNLSLTINTGEQITLSGRTGAGKSTIFKLLLGQYKADSGNVFIYGQDASKLPDNIKRKF
FGYVEQHFRMIPGTVLEQITLFDESINREMAEKAAITVGLHSTICKLEKGYNTPCTSSLF
SQGQWQLLSIARAIASEPKLLLLDEITANLDADTEQSVLKVLKRASENRTVISISHRLYQ
QTGGRQIAIK
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagtgaaaaagttgggtttgatacaagtcactcagaatgtaatgaagctgaataag
ctcctgtcattgggaattataattactgttgtcggagccgtaataagtgctcttttacct
ccgttagtcttggaacagataatcaatctgttgacatccggcagcactgttaccattccc
ttggcaatttcatattttgtattgttggctttaacaagtatccttgactctttaagagaa
agtctattagttgttttcgggcagaagattacccacgggctgaggagtaccctttgtgaa
aagttttccaatcttccggcagatatgttcgtaaagcaagagccgggtgctgtagtctca
cggtttgtaaatgatgttgataccgtagagtctttattcacatccggtatcatcagtatg
tttgcagatgcctgcaaagtgattagcatttttgctattcttttcattaagaacaaagga
ctggcacttgttttattattgctgacaccgttaatatttctatttacccgtatggtacaa
aagcgaatgttggcagctcagattgacaatcgtattgcagtagaaaaagcgacaaaccat
gttcctgaaacgattaaatctattcgcacaattcattcgcttcgtaaagaaaaatatatg
tgtgaagtctatgataaacatatacaggacagttataatgcagtagaaaagaccaatttc
tatgatgcagtctattctccaatcattttgattattaacgctttcgttgttgcagtagtt
atgctgctttcggcaaccggtgttcccgggattcaaagctttttcggtatgtcggtaggt
acggcagtcgcagttatcaattatatcagttctatttttggaccacttgaaagtatcgga
atggaaattcagaccatacagtctgccgtagcaggcgtacatcgtattgatgaattttta
tctttggatgagcgttttgaaacagatgaaaatatagacttgaatatgctgatggaaagt
aatcgtgcctgcgtggaattgcagaatgtcacattcggatatgagcccaattccaccata
ttaaacaatttgagcttaacaataaatactggggaacaaatcactttatccggaagaacc
ggagcaggaaaaagcacgattttcaaattgcttttgggtcaatataaagcagattcaggc
aatgtgtttatatatggtcaagacgcttccaagttacctgataacataaaacgaaagttc
ttcggatatgtagaacagcattttagaatgattcctgggaccgttttggagcaaattacc
ctatttgatgaatcaattaaccgagaaatggcagaaaaggctgcaattacggttgggtta
cacagcacaatctgtaaattagaaaaaggctataatacaccgtgtacttcctctcttttt
tcgcaggggcaatggcagctcttgtccattgcacgtgcaatcgcttcagaaccgaaactg
ctgttgctggatgagataactgccaatttagatgctgatacagaacagtctgtgttgaaa
gttctgaaaagagcatcggaaaatcggacagtaatctctatttcccacagactatatcaa
cagacgggcggacgacagattgcaatcaaatga
DBGET
integrated database retrieval system
