Clostridium scindens: HDCHBGLK_01898
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Entry
HDCHBGLK_01898 CDS
T06591
Symbol
inlA
Name
(GenBank) Internalin-A
Organism
csci
Clostridium scindens
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FIVAR
LRR_4
Big_1
LRR_8
Invasin_D3
MG4
LRR_6
LRR_EndoS
LRR_14
LRR_Zer-1
LRR_LRWD1
ATPTG10
LRR_9
Motif
Other DBs
NCBI-ProteinID:
QBF74496
UniProt:
A0A494WQS3
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Position
1866328..1871565
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AA seq
1745 aa
AA seq
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MKKLRKIVASIVMLSVAFCMVPGMSAQADTCGGLEEVDVYTPGEDEVIQDPALHWAVRSA
MNAIKARPKLTAEMVGDPSVKNISYEQCNHPEDFEQWTQPYWIEDLSGLEYAKSAKMIDI
GYTSSVEGKSIKDLRPLSGLTQLEELILKQDGITDISPVKNLVNLTVFDVSVNREIQDVS
AIADMTKLKRLNISFNKVENIDAISGLVSLEYADVSKNNISTLPDMSKLEKLTALNISHN
NLTDISALADAKNLTELNLKGNTGVTDLKPLAELIYLEKDKTFLPDDSKKDDLFAAIAVN
QLFWKFNISKMTTSDLENVGLALEAYEALTADQKAYMDSDRVKAAKDNKEKVENGQAPDY
YPEYDEGGEKQPIWNRIEIKVVDKYGNPMPNVAFEKTMSGSVVKEAVTDENGVLSIAHTT
LDYLGECVIAPKGDTYVAIPEQVTYTVLVGGITESINGKLANGFEELEMVLWPKDEYVDK
SALQNAIESAGSVEEQYKYTADSYATYQEALTKAQQTYDDVDATKEETAEAEAKLTAAIN
GLTKTDILTRLKLIVKDENGNLFTRPFKFQIRVPDTGAEAWNDKSDAYTGTAYLQASPGW
QDGKEWEVLACYEEPYKIEPFRVTIGVKDGQRYFKTVDGETVGVDFEKQVVARGIQSAEA
TIQPDGTVLQAYIEKAKAYDVAEWMPSTWKVLQEKITAAENAVNTSGATQEVYNQCAAEL
LRAMNGLKPIADKTELKKQVELEYSYSETSFTATSWQAYQVVLQQAKAVLNNGDAEQQQV
DDAVAALKEARSQLVVRANTKALEQKISEAKALNSDDYESGFDALLAAIADAEAVCKNAD
ATQGEVDAQVTAISNAIAGLVKKPVEVDYSCYPGVFKAKVIDENGQPLEGVKFDAYVDGK
KVEDTYNELKSTSQGIIQWYVTSGETYIKLADDRFTTLDEHWFVASGAGWTSAMTSIDGK
PYAEGTKLTYTLKKSGGETPDPGEAVLSDKKAFRAKVVDESGNPVGGVSFTQTPDYQDVT
LSDITSNDNGVIEYTVTGNDGGLKVEIRLKEGQAAGENQTWSCEEIHTYQTNFVWPTPAI
TSVDDVSVDETTEIVYTLKKVGSSTPEPGTVDKSKLKERLDVASLFDGKEADYTAESYQA
LQSAKAAAQLVYDKVDATQPEVDEEYQKLDAAIKGMKEVEKPIVTDKSNIRILVVDENGQ
KVTDSIAFALKQDSYAGTAYSANGVVEYTISDADQGVAKITVSLKNESVVINGKEYYAEP
ASHEFTLSSSSLGVVITTVDGEVLEDTREVKFVLKEKEVGIDTDKLESELQTAKAIEQGN
YTRNSYNTLQSAISAAEGLLKSETLTQQAVNDAEAALVSAREGLKEVTGMRTLQIPVEGD
APANLEFVRYDVKYSVANKLFANDGALTWAPGIYDEGEYEFYLPDTSAYIATPGLIKVQV
EKEDGTPVIKTINGVPAAEAEAKFVISAKGTDTSDILTFRALVQDDKGNALSGLKFNIEF
KQIEQTVVNAEKEAREAAYTEEVISDENGIISYQVTMWDTNTEATVSLQDGQGWTTDQVA
VFSVIADPADPDRAIIEKINSAAPADQKVVFKIQEEGGVPAPDRTRLDAAMEQAAKIDAS
LYTEESYLAVTTALEAARKLGDGAAQEELDNAAQAIEAAIGALQKKDPKPVEPENPGEPD
RPGETDTPDSGNGNGNQKPQSQNSDKTANNQKAVKTGDSAQTLPLLAVMIMSLCVLGVSL
KKRCR
NT seq
5238 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaactaaggaagattgtagcatcgatagtgatgttgtccgtggcattttgtatg
gtgccgggtatgagcgcccaggcggacacttgcggaggtctggaagaggtggatgtgtat
acaccgggcgaggatgaggtgattcaggatccggcactccactgggcggtaagatccgca
atgaatgccattaaagcaagaccaaagcttacagcagagatggttggggatccatcagta
aaaaatatttcttacgagcagtgtaaccatccggaggatttcgaacagtggacgcagccg
tactggatcgaggatctatcaggcctggaatatgcgaaatcagctaagatgatagatatt
ggttatacatcatctgtagagggtaagtctatcaaggatttgcgtccgctttctgggctt
acgcagctggaagagctgattctgaagcaggatggtattaccgatattagtccggttaag
aatttggtaaatcttacagtctttgacgtatcagtaaaccgtgagattcaggatgtttcg
gctattgcagatatgacaaagttaaagagattgaatatttcatttaataaggtggaaaat
attgacgcgataagtggactggtcagtctggagtatgcagatgtttccaaaaataatata
tctactttgccagatatgagcaaactggaaaaactgactgcattaaatatttctcacaat
aatttgactgatatttcagcgcttgcagatgcaaagaatctgacagaactgaatttgaaa
ggaaatacaggcgttacggatcttaagcctctggcagagttgatctacctggagaaggat
aaaacatttcttccggatgacagcaagaaagatgatttatttgctgcaattgcagtaaat
cagctgttctggaaattcaatatcagcaagatgacaaccagtgatctggaaaatgttgga
cttgccttggaagcttatgaggcgttaactgcagatcagaaagcatacatggacagtgac
cgtgtgaaagcagcaaaggacaacaaagaaaaagtagaaaatggacaggcaccggactat
tacccagaatatgatgaaggtggagaaaagcagccgatatggaatcgaatcgagatcaaa
gttgttgataaatatggaaatccgatgccgaatgttgcatttgaaaagacgatgtccggt
tcagttgtaaaagaagcggttactgatgaaaatggtgtattaagcatagcccatacgaca
ttggattatcttggagagtgtgtgatagcgccaaaaggtgatacatatgtggcaattccg
gagcaagttacttatacagtactggtcggagggattaccgaaagtattaacgggaaactg
gcaaatggttttgaagagttagagatggttctgtggccaaaagatgaatatgtggataag
agtgcgcttcagaacgcaatcgaatcagccggatctgtagaagagcaatataagtataca
gcagatagttatgcaacttatcaggaagcacttacaaaggcacagcagacatatgatgat
gtagatgcaacaaaagaagaaacagctgaggccgaagctaaactgactgcagcaattaat
gggctgacgaagacagatattttgactcggttgaaactgatcgttaaagatgagaatggt
aatctatttaccagaccgttcaaattccagattcgtgtacctgacacaggtgcagaagcg
tggaatgataagtcggatgcatatacaggaactgcttatcttcaggcatctccaggatgg
caggatggaaaagagtgggaagttctggcttgctatgaagaaccttataagatagagcca
ttccgggtaaccataggagtaaaagacggacagagatattttaagaccgttgacggtgaa
actgtaggtgtagattttgaaaagcaagttgtggcaagaggcatacagtcagcagaggca
acgattcaaccagacggtactgtacttcaagcatacattgagaaggcaaaagcatacgat
gtagctgagtggatgccttctacctggaaagtacttcaggagaaaatcacagccgctgaa
aatgcagtaaatacaagtggtgcaacacaggaagtatataaccaatgtgcagcagagcta
ctcagggcaatgaatggactgaagccgattgcagataagacagagttaaagaaacaggta
gaactggaatattcatacagtgaaacttcctttacagctacaagttggcaggcatatcag
gtagtactacagcaggcaaaggcagtattaaataatggtgatgcagaacagcagcaggta
gatgatgcggtagctgcattgaaagaggctcgcagtcagttagttgtaagagcaaataca
aaagcacttgagcagaagatcagtgaggcaaaagccctaaacagtgatgactatgaaagt
ggatttgatgcgttgcttgcagcaatcgcagatgctgaggcagtgtgcaagaatgcagat
gcaacacagggagaagttgatgcacaggtaacagcaattagcaatgcaattgcaggttta
gtgaaaaaaccagtagaagtagactattcatgttatccgggcgtgtttaaggccaaagtt
atagatgagaatggtcagccactggaaggcgtgaagtttgatgcttatgtggatggaaaa
aaagtagaggatacctataatgaattgaaatctacatcacagggaatcattcagtggtat
gtaacttcgggtgagacatatatcaaacttgctgatgacaggtttactactctggatgaa
cattggtttgttgcttccggagcaggatggacgtctgctatgacatccattgacggcaag
ccatatgcagagggaacaaaactgacttatacactgaagaaatccggtggagaaacacca
gatccgggagaagcagtattatcagataaaaaagcattccgtgcgaaggttgtggacgaa
agtggaaatccggtcggtggagtaagctttacacagacaccggattaccaggacgtgaca
ctgagtgatattacaagtaatgataatggagtaattgaatatacagtgactggaaatgac
ggagggctgaaggttgagattagattaaaggaaggacaggcagcaggagagaatcagacc
tggagctgtgaggaaatccatacatatcagaccaattttgtgtggccaacaccggctatc
acatctgtagacgacgtttctgttgatgagacaacagaaatcgtatatacattgaaaaaa
gttggcagtagtaccccggaaccgggaacagtagataagtccaagctaaaggaacgtttg
gatgtagcaagtctctttgatggtaaagaagcggactatacagcagaatcttatcaggcg
cttcaatctgcaaaagcagcagcgcagttggtgtatgacaaagtggatgctacacagccg
gaagtagatgaagagtatcagaaactggatgcagcaatcaaaggaatgaaagaagtagaa
aagccaattgtaacagacaaatctaatatccgcattctggttgtcgacgaaaatggtcag
aaagtaacagacagtattgcatttgcgctgaaacaggattcttatgcaggaactgcatac
agtgcaaatggagttgttgagtatacaatcagcgatgcagatcagggtgtggcaaaaatt
accgtgtcacttaagaatgagagtgtagtgattaatggaaaagaatactatgcagaacct
gcaagccacgaatttacactttcttcaagttcactgggagttgtgattactaccgttgac
ggagaggtattggaagataccagagaagtgaaatttgtactgaaggaaaaggaagtcggc
atagatacagacaagcttgaatcagagcttcagacagccaaagcaatcgaacagggcaat
tatacccggaacagttataatacgctgcaatcagcaatcagcgcagcagaagggcttctt
aaatctgagacacttacccagcaggcagtgaatgatgcggaagcagcacttgtgtctgca
agagaaggattaaaagaagtaacaggtatgcgtacacttcagattccggtagaaggagat
gctccggcaaatctggaatttgtaagatatgatgtgaagtattccgtagcaaataaatta
tttgccaatgacggagcacttacatgggcaccgggaatatacgatgagggagaatacgaa
ttctatcttccggatacttctgcgtacatcgcaacaccaggtttaatcaaggtgcaggtg
gaaaaagaagatggaacgccggttattaaaacaatcaacggtgtaccggctgcagaggca
gaggcgaaatttgtgatttctgcgaaaggaacagatacatctgatattctgaccttccgt
gcattagtacaagacgataaaggaaatgcactttccggattgaaattcaatattgaattc
aaacagattgagcagacagttgtaaatgcagagaaggaagcaagagaagctgcttataca
gaagaagttatcagtgatgaaaatggtatcatttcttatcaggtaacaatgtgggatacc
aacacagaggcaacagtatctttacaggatggtcagggatggacaacagatcaggtagca
gtattttcagtgatcgcagatcctgcagatccggacagggctatcattgagaagattaat
agcgccgcaccggcagatcaaaaggtagtatttaagattcaagaagagggcggagttcct
gcaccggatcgcaccagactggacgcagcgatggaacaggctgcaaaaatagatgcatcc
ttgtatactgaagaaagttaccttgcagtaacaactgcgcttgaagccgcacgtaaactt
ggtgatggcgcagcgcaggaagagcttgacaatgcagcacaggcaattgaggctgcgatt
ggagcgcttcagaaaaaagacccgaaaccggttgaaccagaaaatccaggcgaaccagac
aggccaggagagacagatacaccggattccggtaacggcaatggaaatcagaagccacag
agccagaactctgataagacagcaaataatcagaaagctgtaaagacaggtgacagtgcg
cagactcttccattacttgcagtaatgataatgtctttatgtgtgctgggagtttccctg
aaaaagagatgcagataa
DBGET
integrated database retrieval system
