Clostridium scindens: HDCHBGLK_01970
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Entry
HDCHBGLK_01970 CDS
T06591
Symbol
ypdA_3
Name
(GenBank) Sensor histidine kinase YpdA
KO
K07718
two-component system, sensor histidine kinase YesM [EC:
2.7.13.3
]
Organism
csci
Clostridium scindens
Pathway
csci02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
csci00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HDCHBGLK_01970 (ypdA_3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
csci01001
]
HDCHBGLK_01970 (ypdA_3)
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
csci02022
]
HDCHBGLK_01970 (ypdA_3)
Enzymes [BR:
csci01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
HDCHBGLK_01970 (ypdA_3)
Protein kinases [BR:
csci01001
]
Histidine kinases
Other
HDCHBGLK_01970 (ypdA_3)
Two-component system [BR:
csci02022
]
Other families
YesM-YesN
HDCHBGLK_01970 (ypdA_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
His_kinase
HATPase_c
dCache_1
HATPase_c_2
HAMP
Motif
Other DBs
NCBI-ProteinID:
QBF74568
UniProt:
B0NF52
LinkDB
All DBs
Position
1944070..1945845
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AA seq
591 aa
AA seq
DB search
MKKEEKDKKKYSLRIRMLEINVGIALVSFLLCGVLFICSVSWVIGKYIDHDLDFFLKEAG
ENIEKRMEYMTEVLNELRSSELLMEYLRDGGNTYSLEKVRQAFSEAVDINNSSNRGDEGM
PLVDCVYLFRNSGEYITDFYYAIVPGDQEKSDQIIANVWKVYRDTRDNEIGFETYCYRDG
KSLYLACPILNDSLEEQGSLVFRLNIKTIYSLMNQVGDYRGGVCAIYTKKGNILETYPKN
VDLLGKDWKEVSHNTPYIGKIGEEKYRLYNHELCMDLRVAIGIPENYAIKILYDSIDIYV
VGIIAIIIAGILSFGVFTIKMTSPIEEVNEKLKLVGQRNFQAKLPDYDSKEFHAISCGFN
QMTKEIDYLVNEVYEKQILIKEMELKFLQTQMNPHFMFNVLNALALQAQIDGNRELSKKI
STFSQLIQAKIYRSDTEKVQIKQELEYVKYYLEIQEFRYENNLTYSIQMEKGVEEYYIPK
LCIQLVVENAIVHGLEPKLGKGNVEVDIRKEDEHICICVNDNGIGFDMDGEVLLPLKAKE
ADKVHNRVGLNNVNNIIKLMYGNEFGIHIFSKKGKGVRVTIYLPTDIGEEI
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagaggaaaaggataaaaagaaatattctctgcgaatcaggatgttagaaatt
aatgtggggattgctttggttagtttcctgttatgtggagtattgtttatatgttctgtc
agttgggtaataggaaaatatattgaccatgatttggattttttcttgaaagaagcagga
gaaaatatagaaaaaagaatggaatatatgacagaagtcctgaatgaattgcgctcctca
gaactattaatggagtatttgagagatggagggaatacatacagtttggaaaaagttaga
caagcattttcagaggctgtggatatcaataattcgtctaaccgtggggatgaaggaatg
ccgttggtggattgtgtctatcttttccgaaatagcggcgaatatataacagatttttat
tacgctatagttccgggggatcaagaaaagagtgatcagatcattgcaaatgtgtggaag
gtatatagggatactagggacaatgaaattggctttgaaacttattgctatagagatgga
aagagtttatatttagcatgccctattttaaatgattctttggaggagcagggcagtctt
gtatttcgattaaatataaagactatatacagtctaatgaatcaagttggtgattacaga
gggggagtttgcgcaatatatacaaagaaagggaatattctggaaacgtatcctaaaaat
gtggatttattagggaaagattggaaagaagtttcacataatactccgtatataggaaag
attggagaggagaaatacagattgtataatcatgaactgtgtatggacctccgagttgcc
atagggataccagagaattatgcaattaagatattgtatgattctatagatatttatgta
gtcggaattatagcgatcattatagctgggatacttagttttggagtgtttacaattaag
atgacaagtcctattgaagaagtcaatgaaaaattgaagctagttggacagagaaatttt
caagcaaaacttccagattatgatagtaaggagtttcatgcaatcagttgtggatttaat
cagatgacaaaagaaatagactatctggtaaatgaagtgtatgaaaaacagatactgata
aaagaaatggagctgaaatttcttcaaacccaaatgaatcctcattttatgtttaatgta
ttaaatgcattagcgctacaagcacagatagacgggaatcgggagttaagtaaaaagata
tccacattttcacagttgatacaagcaaaaatttatcggagtgatactgagaaagttcag
ataaaacaagaactagaatatgtcaaatactatttagagattcaggaatttagatatgaa
aacaatttaacatattcgattcaaatggaaaaaggagttgaggaatattacatacccaaa
ctatgtattcaattagtggtagaaaatgcaatagtacatggtttggaaccgaaacttgga
aaaggaaatgtcgaagtagatataagaaaagaagatgaacatatatgcatttgtgtaaat
gataatggaatcggatttgatatggatggagaagttctgctacctttgaaagcaaaagag
gcggataaagtgcataatagagtaggacttaataatgtaaacaatattatcaaattaatg
tatggaaatgaatttgggatacatattttttctaaaaagggaaaaggagtaagagtaacg
atataccttcctactgatattggagaggagatataa
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