Clostridium scindens: HDCHBGLK_02318
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Entry
HDCHBGLK_02318 CDS
T06591
Name
(GenBank) hypothetical protein
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
csci
Clostridium scindens
Pathway
csci03030
DNA replication
csci03430
Mismatch repair
csci03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csci00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HDCHBGLK_02318
03430 Mismatch repair
HDCHBGLK_02318
03440 Homologous recombination
HDCHBGLK_02318
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csci03032
]
HDCHBGLK_02318
03400 DNA repair and recombination proteins [BR:
csci03400
]
HDCHBGLK_02318
Enzymes [BR:
csci01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HDCHBGLK_02318
DNA replication proteins [BR:
csci03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HDCHBGLK_02318
DNA repair and recombination proteins [BR:
csci03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HDCHBGLK_02318
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_delta2
Hda_lid
Motif
Other DBs
NCBI-ProteinID:
QBF74910
UniProt:
B0NE81
LinkDB
All DBs
Position
2266172..2267152
Genome browser
AA seq
326 aa
AA seq
DB search
MKSLNEDIKTGQFKPAYLLYGEEAYLKKQYKDKLTKAMLPESDTVNYAYYEGKGTNPAEL
IDLAETMPFFADRRLIVVENSGFFKNATPELADYIKNMPETACFIFVESEVDKRGKMYKA
VKDKGRAVEMGRQDEKTLLYWLAGMVKKEGKQIKESTARYLVAKTGTDMENLEKEMEKLF
SYTLGQTEITVQDVDEICTTQVTNKIFDMVEAVAAKQQKQALDYYYDLLALKEPPMRILY
LLARQFKLLMEVKDLSGRGYDKPQIAKTAGLHPFVAGKYIKQCRSFSKEELRSIMEEAAN
TEEMVKTGRLNDRMSVELFIVKYSSP
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagtttaaacgaagatattaagacaggacaattcaagccggcctacctcctctat
ggggaggaggcctatttaaaaaagcagtataaggataagcttacaaaagccatgcttccg
gaaagcgacaccgtgaactatgcttactatgaagggaaaggcacgaacccggcggaactg
atcgatctggctgagacaatgccgttttttgcagaccgcaggctgatcgtggtggagaac
tctggcttctttaaaaacgcgactccagaacttgcggattatattaagaatatgccagag
acggcatgttttatttttgtggaaagcgaagtagacaagcgtggcaagatgtacaaggcc
gtcaaggacaaggggcgggccgtggagatgggccgtcaggacgagaagacgcttctgtat
tggctggccgggatggttaaaaaggaaggaaagcagatcaaagagtccactgccaggtat
ctggtggccaaaaccgggacggatatggagaatctggaaaaagagatggagaaactcttt
tcttatacgcttggacagacggagattaccgtacaggatgtagatgagatctgcaccacg
caggttaccaataagatcttcgacatggtggaagcagtagccgcaaagcagcagaagcag
gcgctggattattattatgacctgctggcgctgaaagaaccccccatgcggatcctgtat
ctacttgcccgccagttcaaactgctgatggaagtaaaggatttgtcgggacgcgggtat
gataagccgcagatcgcgaagacggcaggccttcatccttttgttgcaggcaagtatata
aaacagtgccgcagcttctccaaagaagaattaagaagcatcatggaagaagcggcgaat
acggaagaaatggtgaagaccgggcggctgaacgacaggatgagcgtggaacttttcatt
gtaaaatatagttccccgtga
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