Clostridium scindens: HDCHBGLK_02321
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Entry
HDCHBGLK_02321 CDS
T06591
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
csci
Clostridium scindens
Pathway
csci03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
csci00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HDCHBGLK_02321 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csci03400
]
HDCHBGLK_02321 (alkA)
Enzymes [BR:
csci01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
HDCHBGLK_02321 (alkA)
DNA repair and recombination proteins [BR:
csci03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HDCHBGLK_02321 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Phage_min_cap2
Motif
Other DBs
NCBI-ProteinID:
QBF74913
UniProt:
B0NE78
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All DBs
Position
2270210..2270821
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AA seq
203 aa
AA seq
DB search
MYFEYGDTEIEYLKRKDKKLGEAIDHIGHIYREVDADIFQSVVHQIIGQQISNAALATVW
GRFRNMVGEVTPQAVLKYQAEELKGLGMSFRKAEYIRNFAEKVCQGELDLEELCQMDDQK
VIKTLSSLRGIGVWTAEMLLIFCMQRPDVLSYGDGAILKGMQILYHHRKMDKNLFEKYRK
RYSPYGSVASLYLWAIAGGALEG
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgtattttgaatatggtgatacagagattgaatacctgaaaagaaaggataagaaatta
ggagaagccattgatcatatcggacacatctaccgggaggtggacgcagatatcttccag
tcagtagtgcaccaaatcataggccagcagatatccaatgcagctctggctaccgtgtgg
gggagattcaggaatatggtgggagaagtgacgccgcaggcggtcttaaagtaccaggcg
gaggaactaaaaggtctggggatgtcgtttagaaaggctgagtatatccggaattttgcc
gaaaaagtctgtcagggagaactggatttggaggagttgtgccagatggatgaccagaag
gtgatcaagaccctgtcatccttgagggggattggcgtatggaccgccgagatgcttctc
atcttctgcatgcagaggcctgacgtgcttagttatggagacggcgcgattctgaaagga
atgcagattctgtaccatcaccggaagatggataaaaatctgtttgagaagtaccgaaag
agatacagcccatatgggtcggtggcaagcctgtacctttgggcgattgccggcggagcc
ctggagggctga
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