Clostridium scindens: HDCHBGLK_02395
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Entry
HDCHBGLK_02395 CDS
T06591
Symbol
ypdA_4
Name
(GenBank) Sensor histidine kinase YpdA
KO
K07718
two-component system, sensor histidine kinase YesM [EC:
2.7.13.3
]
Organism
csci
Clostridium scindens
Pathway
csci02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
csci00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HDCHBGLK_02395 (ypdA_4)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
csci01001
]
HDCHBGLK_02395 (ypdA_4)
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
csci02022
]
HDCHBGLK_02395 (ypdA_4)
Enzymes [BR:
csci01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
HDCHBGLK_02395 (ypdA_4)
Protein kinases [BR:
csci01001
]
Histidine kinases
Other
HDCHBGLK_02395 (ypdA_4)
Two-component system [BR:
csci02022
]
Other families
YesM-YesN
HDCHBGLK_02395 (ypdA_4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
His_kinase
HATPase_c
dCache_1
DUF4625
Motif
Other DBs
NCBI-ProteinID:
QBF74987
UniProt:
B0NDZ6
LinkDB
All DBs
Position
complement(2332186..2333964)
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AA seq
592 aa
AA seq
DB search
MTMDKYKKTKIPSLRTFITAAISIIVTVVLLCSIWFCYSRTSAILTENYENSITQNLELI
NHQFIEQIDLIDSIIPLYLADTIISEPLESVDTGKQSAENRLQIEKQMSYLYYSTSLASK
NFTNSIYIISQDETIFKIGTSSSPEPAEFQCRELLKTLDKKEPKLICQTLPRDDGNIYFI
RNLFSSNTGNYIGTFIINIDKDRFLSYHTKDLDPSWFLCLYNSSMAVFSDPDMEKECMAL
KEHGQRIGELSFQTARLNDREYFVASQELSGLDLTSSVAAPKSLMFADLNSILKSYLLLL
TGIVLIGLFTAIAISRAITKPIDKMIYNINQISEKKQSALPPMKIYREFDVWADSFNKML
KQLDIYYNDIFQKQLLLKNSEIHALQTQMNPHFLLNTLNTIAWKAQISDNEEIYQMVISL
GEFLKANTLSKEQDCIALEKELRYVKFYIYLQQQRFEDKISCDIRVPETLMHFLIPCFSI
QPLVENAIVHGLEPKTGKGKLIVQILETDDHCMEISIIDNGVGFPKDFQVRDIASSDTDS
HTHIGLKNLDRRLFLLYGDMAHLSIDSTPGVCTSISFKIPISRGGGVSLHDL
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgactatggataaatataaaaaaacaaaaataccatctctccgtacgtttataaccgcc
gcgatttctatcattgtaaccgtcgtcttgctatgctcaatctggttttgttattcaaga
acatctgcgattttaactgaaaattatgaaaacagtattacacaaaacctggagttaata
aaccatcaatttattgagcaaatagacctgattgattctattatcccgctttatttagca
gataccattatctcggaacctctggaatccgtagataccggtaagcaatcggctgaaaac
aggctgcagatcgagaaacagatgtcctacttatattatagtacgtctcttgcaagcaaa
aattttactaacagcatttatattatttcacaggacgagaccatttttaagattggaacc
tccagttctcctgagcctgcggagtttcaatgccgggaactattaaaaacgctggacaaa
aaagaaccgaaactgatctgtcagactttgccccgggacgatggaaatatctattttatc
cggaacctgtttagctctaacaccggaaactatattggaactttcataattaatattgat
aaagacagattcttatcttaccacaccaaagatctggatccgtcctggtttctgtgcctg
tataattcctctatggctgttttctctgatcctgatatggagaaggaatgtatggcgctc
aaagaacacgggcagaggatcggagaactttcattccagacagcccgcttaaatgacagg
gaatatttcgtcgcttcacaggaactgtcgggacttgatctgacttccagcgtcgccgcg
ccgaaatctttaatgtttgccgacctgaacagtatcctgaaatcttatttactattgtta
acggggatcgttctgatcggtctgtttaccgctattgcgatcagccgcgcgattacaaaa
ccaatagataaaatgatttacaatattaatcagatatccgaaaagaaacagagcgctttg
ccgccaatgaaaatataccgtgagtttgatgtctgggcggattcgtttaacaaaatgctg
aaacaactggatatatattataatgatattttccaaaaacaattattacttaaaaattcg
gaaatccatgcgctgcagacacagatgaatccacatttcctgctgaatactttaaacacg
atcgcatggaaagcacagatcagtgataacgaggaaatctatcagatggtaatctcatta
ggcgaatttttaaaggctaacactctgtccaaagaacaggactgtattgctcttgaaaaa
gaactaagatatgtgaaattttatatttatttacaacagcagcgctttgaagataaaatt
tcctgcgatatccgcgtgccggaaacgcttatgcactttctaatcccctgtttcagtatc
cagccgctcgtggaaaacgcgatcgtacatgggttggagccaaaaacgggcaaagggaaa
ttaatcgtgcaaattttagaaactgacgatcattgtatggaaatctcgatcattgataac
ggagtcggattcccgaaagactttcaggtcagggacattgcctcctctgataccgacagt
catacacatatcggtctgaaaaacctggacagacggcttttcctgctgtatggagacatg
gcgcatttaagtattgacagtacgcccggcgtctgtacaagcatatcattcaaaatacct
atttcacgggggggaggggtatctttacatgatctttaa
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