Clostridium scindens: HDCHBGLK_02695
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Entry
HDCHBGLK_02695 CDS
T06591
Symbol
nfo
Name
(GenBank) putative endonuclease 4
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
csci
Clostridium scindens
Pathway
csci03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
csci00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HDCHBGLK_02695 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csci03400
]
HDCHBGLK_02695 (nfo)
Enzymes [BR:
csci01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
HDCHBGLK_02695 (nfo)
DNA repair and recombination proteins [BR:
csci03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
HDCHBGLK_02695 (nfo)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
QBF75286
UniProt:
A0A494WTQ9
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All DBs
Position
2628360..2629187
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AA seq
275 aa
AA seq
DB search
MLTIGTHMSIAKGIAKTAENVVEMKANTMQIFSRNPRGSNYKTYTEEEIGRFQEIRRKNQ
FGPLLAHAPYTMNLASDKEKVYEFACTVIREDIARMDALGIENIVFHPGSHTGIGIEAGI
RNIIAGLDQAITGDENIMVLLETMTGKGTEIGAKFEHLRAIRDGVRHPERIGICLDTCHV
FAAGYDIVGNLDGVLEEFDRVIGLDLLKAVHFNDSMMPFGSHKDRHSTIGAGEIGLEPLL
RVMRHPALKELPFYLETPLEDAEHKIEIEMIRQKL
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgctgacaataggaacgcatatgtctattgccaaaggaattgccaaaacggctgaaaat
gtggtagagatgaaggccaataccatgcagatattcagccgtaatcccagaggctcgaat
tataaaacctatacggaagaggagataggaagattccaggagatccgtcgcaaaaaccag
tttggccccttgctggctcatgcgccatatacgatgaatctggcaagcgataaggagaag
gtctatgaatttgcatgtacggttatccgtgaggatatcgcaaggatggatgccctgggg
attgaaaatattgtatttcatccgggaagccatacgggcatcggcatcgaggcaggaatc
cgcaatattatcgcaggacttgaccaggcaattaccggggatgagaatatcatggtgctg
ctggagactatgactggaaaagggacggaaattggagcaaagttcgagcacttaagagca
atccgggatggagtaagacatccggagcggattggaatctgcctggatacctgtcatgtg
tttgccgccgggtatgatatagtaggaaatttggatggcgtattggaagagtttgatagg
gtgattggcctggatttgctcaaagcagtccattttaatgacagcatgatgccttttggc
tctcataaggatcggcattccacgataggagcgggcgagattggcctggagccgctgcta
agggtcatgagacatccggcgcttaaggaacttccgttttacttggagacgccgcttgag
gatgcagagcacaaaatagagatagagatgatacgccagaaactctaa
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