Clostridium scindens: HDCHBGLK_02813
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Entry
HDCHBGLK_02813 CDS
T06591
Symbol
potD
Name
(GenBank) Spermidine/putrescine-binding periplasmic protein
KO
K11069
spermidine/putrescine transport system substrate-binding protein
K11070
spermidine/putrescine transport system permease protein
Organism
csci
Clostridium scindens
Pathway
csci02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
csci00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HDCHBGLK_02813 (potD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csci02000
]
HDCHBGLK_02813 (potD)
Transporters [BR:
csci02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Spermidine/putrescine transporter
HDCHBGLK_02813 (potD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
BPD_transp_1
Lipoprotein_8
MotA_ExbB
Motif
Other DBs
NCBI-ProteinID:
QBF75403
UniProt:
B0NBC3
LinkDB
All DBs
Position
complement(2752800..2754686)
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AA seq
628 aa
AA seq
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MIKKILQRFYLVLIFVLLYAPIVTLMVLSFNKSKTRSKWGGFTTKWYVELFKNEQIMNAL
YTTLIIALLSALIATIIGTAAAIGIQAMHRKFRTTMMGVTNIPMLNADIVTGISLMLLFI
AFRFSLGFSTILLAHITFNIPYVILSVMPKLKQTNVSTYEAALDLGASPVYAFFKVVFPD
ILPGVSSGFLLAFTMSLDDFIITHFTKGPGVDTLSTKIYSEVRKGIKPEMYALSTILFLS
VLLLLILVNIAPDEKPDKHKAVTARSIRRHKAGRFLLRKVVPVMMALVVIVGGFFYGSKA
ATGGDNQVIVYNWGEYMDPETITMFEKETGIEVVYEEYETNEIMYPKIQSGAIAYDVVCP
SDYMIQRMIENDLLAEIDFDNIPNIRNIGDTYMDQSRQFDPENKYSVPYCWGTVGILYNK
TMVDEPIDSWSVLWDEKYKDNILMQDSVRDAFGVTLKYLGYSLNSTDLDELEAAKKLLIK
QKPLVQAYVIDQVRDKMIGNEAAIGVIYSGEAIYTQWENPNLEYVIPKEGSNVWIDSWVI
PKNAKHKENAEKFINFICRPDIAKMNFDYITYSTPNEAGRQLIEDPALRNSPIAFPDPEE
LANCETFKFLGDENDALYNELWREVKSK
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
ttgatcaagaaaatcttacagcgtttttacctggtgctcatcttcgtgcttctgtacgct
cctatcgtaaccttgatggtgctgtctttcaataaatcgaagacacgctccaaatgggga
ggatttaccaccaaatggtacgtagagttattcaagaacgagcagattatgaatgccttg
tatacgaccctgatcatagctcttctgtccgccctgatcgcgacgatcataggaacggcg
gcggcaatcgggatccaggccatgcaccggaaattccgcaccaccatgatgggggttacc
aacattcccatgctgaatgcggatattgtgaccggcatctccctgatgctgctcttcatc
gcatttcggttttcgctgggattctcgaccatactgctggctcacattacctttaatatt
ccttatgtgatattaagcgtcatgcccaagctaaagcagaccaatgtaagcacttacgag
gcggccctggacctgggggcttctccggtctatgccttcttcaaggtggtattcccggat
atccttccaggcgtatcatccggattcctgttggcctttaccatgtcgctggatgacttt
atcatcacgcattttaccaagggccctggagtggacaccctgtccaccaagatatacagt
gaagttcgaaaaggcatcaagccggaaatgtacgcgctctccaccatactcttcctgtcc
gtgctcctgctgctcattctggtcaacatcgcgccggatgaaaagccggataagcacaag
gccgttaccgcaagaagcataaggcgccataaggccggccgcttccttcttcgcaaggtc
gttcctgtcatgatggcattggtggtaatcgtgggcggcttcttctatggctccaaggca
gccacaggaggcgataatcaagtgattgtctacaattggggagaatatatggacccggag
actatcaccatgttcgagaaagagacggggatcgaggtcgtctatgaggaatacgagacc
aacgagatcatgtatcccaagatccagtccggcgccattgcttatgacgtggtctgccct
tccgactacatgatacagagaatgatagaaaatgacctgctggcagagattgattttgac
aacatcccaaatatcaggaatatcggcgatacttatatggatcagtccaggcagttcgac
ccggagaacaagtactccgtgccatactgctggggaacggtaggtatcctctataacaag
accatggtggatgagcctatcgacagctggtccgtactgtgggatgagaaatacaaggat
aatatcctgatgcaggacagcgtgcgcgacgcgtttggagtcacgctgaaatatctcggc
tactcgcttaattccaccgacctggatgaactggaggcggccaagaagttgctgatcaag
cagaagcctcttgtgcaggcctacgttatcgaccaggtgcgagacaaaatgattggcaat
gaggccgccattggcgtcatctactccggtgaagccatctacacccagtgggagaatccc
aatctggaatacgtgataccaaaagaaggttccaatgtgtggattgattcctgggtcatt
ccaaagaacgccaagcacaaggaaaatgccgagaaattcattaacttcatctgccgcccg
gatatcgcgaagatgaactttgactacatcacctactctacgccgaatgaggccggaagg
cagctgattgaagaccctgctcttcgaaacagccccatagccttcccggatccggaagaa
ctggcgaactgtgagaccttcaaattcctgggagatgaaaacgacgccctctacaacgaa
ctgtggcgggaagtcaagtcaaaataa
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