Clostridium scindens: HDCHBGLK_02881
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Entry
HDCHBGLK_02881 CDS
T06591
Symbol
rimO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
csci
Clostridium scindens
Brite
KEGG Orthology (KO) [BR:
csci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csci03009
]
HDCHBGLK_02881 (rimO)
Enzymes [BR:
csci01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
HDCHBGLK_02881 (rimO)
Ribosome biogenesis [BR:
csci03009
]
Prokaryotic type
ribosomal protein modification factors
HDCHBGLK_02881 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
TMF_TATA_bd
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QBF75471
UniProt:
A0A494WU03
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Position
2823613..2824938
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AA seq
441 aa
AA seq
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MNILFISLGCDKNLVDSEVMLGLLAAKGYRMVDDEMQADIIIVNTCCFIHDAKEESIQTI
LEMAQYKTDGRLKVLVVTGCLAQRYQQEILDEIPEVDAVLGTTSYDKIVEAVEEALAGKG
HVEVEDIDALPLVDTRRLVTTGGHFAYLKIAEGCDKHCTYCIIPKIRGDFRSVPMERLVK
EAGELAEQGVKELILVAQETTLYGKDLYGEKSLHRLLRELCRISGIRWIRLLYCYPEEID
ENLIQIMKEEKKICHYLDLPIQHANDDILKRMGRRTSKNQLEEIIGRLRREIPDIALRTT
LITGFPGETKEQHEELMEFVDEMEFDRLGVFTYSPEEDTPAAGMPDQVPEEVKEERQAEI
MELQQEIVFDQAEAMIGREVLVMIEGKVADENAYVGRTYKDAPNVDGLIFINTEAELMSG
DFARVKVTGALEYDLIGELME
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgaatatattgtttatatcccttggctgtgacaagaatctggtggattcagaagttatg
ctgggacttctggctgccaaaggataccggatggtggatgatgagatgcaggcggatatc
attatcgtcaatacctgctgtttcatccatgacgccaaggaagagagcatccagacgatt
ctggagatggcacagtacaagacggatggaaggcttaaggtgctggttgtgaccggctgc
cttgcgcagagataccagcaggagattctggatgagattccggaagtggatgcggtgctg
ggaaccacatcctatgacaagattgtagaagcggtggaggaagcgctggctggcaaaggc
cacgtggaagtggaagacatcgacgcgctgccgctggtggatacgaggcgcctggtgacg
acgggcgggcattttgcctatctgaagattgcagaaggatgcgataagcattgtacttac
tgcattattcccaaaatccggggggatttccgaagcgttccgatggagcgccttgtaaaa
gaagccggggagctggctgagcagggcgttaaggaactgattctggtggctcaggagacc
actttatatggaaaggatctctatggagaaaagtccctgcacaggcttcttcgggaactg
tgcaggatcagcggtatccgatggatacggcttctctactgctatccggaagagattgat
gagaacctgatccagatcatgaaggaagagaagaagatctgccattatctggatctgcca
atccagcatgccaatgatgatatattgaagcggatgggaagaaggacgtccaagaatcag
ttggaagagatcatcggaaggctcagaagagagattccggacattgccctgcgtaccacg
ctgatcaccggatttccgggagagacgaaggaacagcatgaagaactgatggaattcgta
gatgagatggaattcgaccgtctgggcgtatttacctattctccggaagaggatacgcct
gcggcaggcatgccggatcaggtgccggaagaagtgaaggaagagcgtcaggcggagatt
atggaactgcagcaggagattgtatttgaccaggcagaggctatgatcggccgggaagtg
ctggtcatgatcgaagggaaagtggccgatgaaaatgcctatgtcggaaggacttataag
gatgcacccaatgtggacggcctcattttcataaatacagaggcagaactgatgtcggga
gattttgccagagtgaaggtgaccggcgccttagaatacgatttgataggagagttgatg
gaatga
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