Clostridium scindens: HDCHBGLK_02896
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Entry
HDCHBGLK_02896 CDS
T06591
Symbol
hadI
Name
(GenBank) 2-hydroxyisocaproyl-CoA dehydratase activator
Organism
csci
Clostridium scindens
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF2229
BcrAD_BadFG
DEDD_Tnp_IS110
FGGY_N
ROK
Motif
Other DBs
NCBI-ProteinID:
QBF75486
UniProt:
B0NB33
LinkDB
All DBs
Position
complement(2838376..2842632)
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AA seq
1418 aa
AA seq
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MSQKELYTLGIDIGSTTVKIALVDENNDIAFSDYERHFANIQETLSDLLGRAIFKLGAVH
ASPVITGSGGLTLAKHLGVPFVQEVIAVSTALQHYAPQTDVAIELGGEDAKIIYFEGGNV
EQRMNGVCAGGTGSFIDQMASLLQTDASGLNEYAKNYKALYSIAARCGVFAKSDIQPLIN
EGASKEDLAASIFQAVVNQTISGLACGKPIRGHVAFLGGPLHFLSELKESFVRTLKLDDE
HAIVPVNSHLFAAIGSAMNSKKDLDVSLQEMQNRLEGKIKMEFEVDRMEPLFSSEADYKE
FAERHAKHQVPVKDLDTYTGKAFLGIDAGSTTTKAALVGEDGTLLYSFYHNNEGDPLGTT
IHAIKDIYSKLPEGVEIVHSCSTGYGEALIKAALLLDEGEVETVSHYYAASFFEPDVDCI
LDIGGQDMKCIKIKNQTVDNVLLNEACSSGCGSFIETFAKSLNYTVGDFAHEALFAKNPI
DLGTRCTVFMNSKVKQAQKEGAEVSDISAGLAYSVIKNALFKVIKVSDASELGNHIVVQG
GTFYNNAVLRSFEKIANCHAIRPDIAGIMGAFGAALIARERYIDCEGTTMLSIEDIEALE
YSTTMTKCRGCTNNCRLTINHFSGGRKFITGNRCERGLGKEKAQNRLPNLFEYKLKRYFD
YQPLGKEEAKLGEIGIPRVLNMYENYPFWFTFFTSLGFRVILSPSSTKKVYELGIESIPS
ESECYPAKLAHGHVQWLIDQGIRHIFYPSVPYERNEFEDANNHYNCPIVTSYPENIKNNI
DAIVNGDVDFIHPFLSLQSEETISYRLVEELSSKFSIPEGEIKSAVHAAWEELAACRQDM
RSKGEETIRYLNETGNRGIVLAGRPYHIDPEVNHGIPELINSYDIAVLTEDSVSHLNPVE
RPLNVMDQWMYHSRLYAAANYVKTTDNLDLIQLNSFGCGLDAVTTDQVASILNDSDKIYT
SLKIDEVNNLGAARIRVRSLLAAIRVREQRNDKRKIQPAAITKVPFTKEMRKDYTILCPQ
MSPIHFDLLEVAFQASGYHVEVLPNDNKQAVDMGLKYVNNDACYPSLMVVGQIMEAILSG
KYDTDKLAVIISQTGGGCRASNYIGFIRRALKKAGFGHIPVISINLSGLEGNPGFKITPS
LALRGIYAAIFGDIFMKCVYRMRPYEAVPGSANAMHEKWKSVCKEFLSQGYPSRRRFKQL
CREIIEDFDNNLELLDVKKPRVGVVGEILVKFLPAANNHLVDLLESEGAEAVVPDLLDFL
LYCFYNQNFKVSHLGMKKSKATMGNLGIKALEWFREPATEAFKKSRHFYPPAKIEELGKM
ASEIVSLGNQTGEGWFLTGEMLELIHSGAANIVCTQPFACLPNHVVGKGVIKELRRRYPN
SNVVAIDFDPGASEVNQLNRIKLMLSTANKNMEASQNS
NT seq
4257 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaaagaattatatacattagggattgatatcggctccactacggtaaaaatc
gccttggtggatgagaataacgatatcgctttttccgattatgagaggcattttgcgaat
attcaggagactctttccgacctgcttggaagagccatcttcaagctgggcgcagtccat
gcttctcctgtgattaccgggtccggcggtcttacgctggccaagcatcttggcgttccc
ttcgtacaggaagtgatcgcggtatctacggccctgcagcactacgcgcctcagaccgac
gtggccatcgagctgggcggcgaggatgccaagatcatttattttgaaggcggcaatgtg
gaacagcgtatgaacggcgtatgtgccggcggtacgggctcatttatcgaccaaatggcc
tcccttcttcagacggacgcctccggcctcaacgaatatgccaagaactacaaggcattg
tactcgattgccgcaagatgcggagtatttgccaaatcagacatacagcctctgatcaat
gaaggggcttccaaggaggatctggccgcttccatcttccaggccgtcgttaatcagacg
atcagcggacttgcctgtggcaagccaatccggggacacgtagcgtttcttggaggaccg
cttcatttcctgtctgaacttaaggagtctttcgtacgtaccctcaagctggatgacgag
cacgccatcgtgcctgtcaactcgcatctgtttgcggcgatcggatctgccatgaactcg
aaaaaagatctggacgtctctctccaggagatgcagaaccgtctggaaggcaagatcaag
atggagttcgaggtagaccgcatggagcctttattctccagcgaggcggattataaggaa
tttgccgagcgccacgcgaagcatcaggttccggttaaggatctggacacctatacaggc
aaggccttccttgggattgatgccggctccaccaccaccaaggcagccctggtaggcgag
gacggcacccttctgtattccttctaccacaataacgagggagacccgctgggcacgacc
atccacgcgatcaaagacatttacagcaaactgcccgagggcgtcgagatcgtccactcc
tgctctaccggatacggcgaggctctgatcaaggccgccctcctgctggatgaaggggag
gtagagacggtatcccattactatgccgcctcctttttcgagccggatgtggactgcatc
ctggacattggcggtcaggatatgaaatgtatcaagattaagaaccaaaccgtagacaat
gtcctgttaaacgaggcatgctcatcgggctgcggctcatttatagagacctttgccaaa
tccctcaactatacggtgggggactttgcccacgaggcgttatttgccaagaatccgatc
gacctaggcacccgctgtactgttttcatgaattccaaggtaaagcaggcccagaaagaa
ggagcggaagtatccgatatttccgccgggcttgcgtactcggtcatcaagaacgcgctg
ttcaaggtaatcaaagtatccgacgccagcgaacttggaaatcatatcgtcgtacaggga
ggcacattctataacaatgccgtgctgcgaagttttgaaaagattgcaaattgccacgcc
atccgtccggatatcgcaggcatcatgggcgctttcggtgctgccctcatagccagggaa
cgatacatagactgcgaaggcacgaccatgctgtccatcgaggacattgaggcgctagag
tactccaccaccatgaccaagtgcaggggctgcaccaacaactgccgtctgactatcaac
catttcagcggcggtcgcaagttcatcaccggcaatcgctgcgagcggggacttggcaag
gagaaggcacagaacaggcttcccaacctgtttgaatataagctgaaacgttactttgat
taccagcctctcggcaaagaggaagcaaaactcggcgagattggaatcccacgggtcctg
aatatgtatgagaactacccgttctggtttaccttctttacgagcctgggctttcgcgtg
attctttctccttcttctaccaagaaggtatatgagttgggaatcgaatccatccccagc
gagtccgagtgctaccctgccaaactggctcacggccatgtgcagtggctgatcgatcag
ggcatccggcacatcttctaccccagcgttccttatgagcgcaacgagttcgaggatgcc
aacaaccattacaactgcccgatcgttacctcctacccggagaatatcaagaataatatt
gacgccattgtaaatggggacgtggatttcatccatccgttcctctctctccaaagcgaa
gagaccatctcctaccggctggtggaagaattatcttccaagttctctattcccgaagga
gagatcaagtctgccgtgcatgcggcttgggaagaactggcagcctgccgccaggatatg
cgcagcaagggcgaggaaaccatccggtatctgaatgagaccggcaaccggggcatcgtc
ctggccggacgcccttaccatattgacccggaagtaaatcacgggattccggaactaatc
aactcttatgacatcgcagtgcttacagaagattccgtctcccacttgaatccggtagag
cggccgcttaacgtcatggatcagtggatgtaccattcccgtctttacgctgcggcgaac
tatgtgaagaccaccgataatctggatctgatccagctgaattccttcggatgcggcctg
gatgcagtaaccactgaccaggtagcctccatcctgaacgactcggataagatctacaca
tcgctgaaaattgacgaggtaaataacctgggcgctgccagaatccgtgtccgttctctt
ctcgccgccatccgggtaagagaacagagaaacgataagcgtaagatacagcctgccgcc
atcaccaaggttccgtttaccaaggagatgcgaaaagactacaccattctctgcccgcag
atgtcgcccattcacttcgatctgctggaagtcgccttccaggcgtccggctatcatgtg
gaggtgctgcccaacgacaataagcaggcggtagatatggggcttaaatatgtgaataat
gatgcctgctatccatctctgatggtagtcggccagatcatggaggccatcctgtccggc
aaatatgacaccgataagcttgccgtcattatcagccagacgggaggcggatgccgtgct
tccaactatatcggctttatccgccgggcgcttaagaaagccggattcgggcacattccg
gtgatctccatcaacctaagcggcctggaaggcaaccctggattcaagattacgccttcc
ctggccctgcgtggaatctatgcggcaatcttcggagacatcttcatgaaatgcgtctac
cggatgcggccttacgaggcagtgcctggctctgccaatgctatgcacgaaaagtggaag
agcgtctgcaaggagttcctatctcagggctatccttccaggaggcggttcaagcaatta
tgcagggagattatcgaggacttcgacaataatctggaactgctggatgtgaagaagccg
cgggtaggcgtggtaggcgagattctggtgaagttccttcccgccgccaacaatcatctg
gtagatctgctggagagcgagggggctgaggccgtggtgcctgatcttctggacttcctg
ctctactgcttctataaccagaactttaaagtgtcgcacctgggtatgaagaagtccaag
gcaaccatggggaatcttggcatcaaggctctggaatggttccgggagcctgccacagaa
gcgtttaagaagagccggcatttttatccgccggcaaagattgaagaacttggcaagatg
gcttccgagatcgtatctcttggcaaccagaccggcgagggctggttcttaaccggagag
atgctggaactgatccacagcggagccgcaaacatcgtatgtacccagccgttcgcctgc
ctgcccaaccatgtggtaggaaagggcgtgatcaaagaactccggaggcgttatccaaac
tccaacgtggtggccatcgacttcgatccaggagcaagcgaagtaaatcagctgaacagg
atcaagctgatgctgtccactgccaataagaatatggaagcaagccagaattcataa
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