Clostridium scindens: HDCHBGLK_02918
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Entry
HDCHBGLK_02918 CDS
T06591
Symbol
smc_4
Name
(GenBank) Chromosome partition protein Smc
KO
K03529
chromosome segregation protein
Organism
csci
Clostridium scindens
Brite
KEGG Orthology (KO) [BR:
csci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csci03036
]
HDCHBGLK_02918 (smc_4)
Chromosome and associated proteins [BR:
csci03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
HDCHBGLK_02918 (smc_4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
Filament
CENP-F_leu_zip
Laminin_II
COG5_N
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QBF75507
UniProt:
B0NB10
LinkDB
All DBs
Position
2863658..2867218
Genome browser
AA seq
1186 aa
AA seq
DB search
MYLKSIEVQGFKSFAHKIKFDFHNGITGIVGPNGSGKSNVADAVRWVLGEQRIKQLRGGS
MQDVIFSGTENRKPLSYASVAITLDNSDHQLPIDFEEVTVARKLYRSGESEYLINGSACR
LKDVNELFYDTGIGKEGYSIIGQGQIDKILSGKPEERRELFDEAAGIVKFKRRKNMSVKK
LEEERQNLLRVNDILAELEKQVGPLERQAETAREYLKKKEQLKTYDINMFLLETDRIQDQ
IRQIDGKLTVTRSELEAASQQYEDMKTEYEAVEEQVDSIDASIEKAKSQLSETTMLKQQL
ENQIELLKEQIHSARMNDAHYDQRARAIDSEIDIREKQLKELEAEQDAIHAQLEEKTKQK
EQAKAELIEVQTRIATITASVEKNKGDIIELLNSRASTKAKIQRYDTMLEQIQVRKARTT
QQMIEARSEIQEQEERLEGFQKELKEVSAKIIVLSEENSKYEAKIQELQALLARQTEQFR
IGQTAYHREQSRLESLKNITERYDGYGNSIRRVMDNKDKEPGLLGVVADIIKVDKDYEIA
VETALGGNIQNIVTLDEETAKRMIQYLKKNKYGRATFLPLTSIRANGGISRQEALKEPGV
IGAANTLVKVDARYQTLSDYLLGRTLVVDHIDHGTAIAKKYNQSLRIVTLEGELINPGGS
MTGGAFKNSSNLLSRRREIEEFEKTVKQLKREMDEMEASSERLRRERAGYYEKMDEISGK
LQRDYVIQNTAKMNAEQALAKIKNAKEMSETAQKEADELDAQITDIIDNQESINVELDTS
ETLEQELTRQIEAEQEVLNGVHEEEAGKLKSNEAIHLEFASLEQKFTFVMENTSRIREEI
EKFQSELAGLEESKGGTSKEIEDKESRIADLRQTIEDSKDLFAEIQLEIEKFKQEREDLN
QKHKVFLQKREDLSKHMSDLDKEIFRLDSQKEGYEAASEKQINYMWEEYEITFNRARELR
DTNLTDLSKMKKRILELKSEIKGLGNVNVNAIEEYKNVSDRYEFLKGQHDDLVEAEATLE
QIIEELDIAMRKQFQEQFQLIAKEFDTVFKELFGGGKGTLELMEDEDILEAGIRIIAQPP
GKKLQNMMQLSGGEKALTAIALLFAIQNLKPSPFCLLDEIEAALDDNNVGRFAQYLHKLT
KNTQFIVITHRRGTMTAADRLYGITMQEKGVSTLVSVSLLEDELDQ
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atgtatctaaaaagtatagaggtgcaaggattcaagtcttttgcacataagataaaattt
gatttccataacggtattactgggatcgtaggccccaacggaagcgggaagagcaacgtc
gccgatgctgtgagatgggtgctgggagaacagcgcatcaagcagcttcggggcggaagc
atgcaggatgtcatcttttctggaactgaaaaccgcaagccgctcagttatgcgtcggtt
gcgatcaccttggacaacagcgaccatcagctgccgatcgattttgaggaagtcacggta
gcgcgcaaactgtaccggtcaggggagagcgagtatctgattaatggaagtgcctgccgt
ctcaaagatgtaaatgaactgttttatgatactggaatcggcaaggaaggatattccatc
atcggccagggacagattgataagatattaagcggcaagccggaagaacgccgggaactt
tttgatgaagccgcaggcattgtcaaattcaagcggcgcaagaacatgtcggtaaagaaa
ctggaggaggaacgccagaatcttctgcgtgtcaacgacatactggcggaactggaaaag
caggttggaccactggagcgccaggcagagacagccagggaatacctgaagaagaaagaa
caattaaagacttacgatattaacatgttcctgctggagacggaccgtatacaggaccag
ataaggcagatcgacggaaaacttactgttaccagaagcgagctggaagcagccagccag
cagtatgaggacatgaagacagagtatgaggcggtagaggagcaggtggatagcattgac
gcatctattgagaaggcaaaaagccagttgagcgagaccaccatgctcaagcagcagttg
gagaaccagatcgagttgctcaaagagcagatccacagcgcccgcatgaatgacgcccac
tatgaccagcgtgcaagggccattgattccgagattgatatccgggagaagcagctgaaa
gagctggaagccgagcaggatgcaatccatgcccagctggaagagaagacgaagcaaaaa
gagcaggccaaggccgaactgattgaggtgcagaccaggattgccaccattacggcatcc
gttgaaaagaataagggcgatattatcgaactgctgaacagccgggcctcaactaaggcg
aagattcagcggtatgacacgatgctggaacagatccaggtgagaaaagcaaggacgacc
cagcagatgattgaagccaggagcgagattcaggagcaggaagagcgcctggaaggattt
caaaaggagttaaaggaagtatctgcaaagatcatcgtcctgtctgaggagaatagcaag
tatgaagcgaagatccaggaacttcaagccttgcttgccaggcagacagaacagttccgc
attggacagaccgcgtaccacagggaacagtcaaggctggaatcactgaagaatattacg
gagcgttatgacggatatggcaacagcatccggcgggtaatggataacaaggacaaggag
cctgggctattaggcgtcgtggcagatattatcaaagtagacaaggactatgagattgcc
gtggagacggcgcttggaggcaacattcagaatatcgtcactttggatgaagagactgca
aaacgaatgatccagtacttaaagaagaacaagtacggacgtgccaccttccttcctctt
actagtatccgcgcaaacggcggtatcagcagacaggaggcgttaaaagagccgggcgtc
attggagcagctaatacgcttgtcaaagtggacgccagatatcagaccctgtcagactat
ctgcttggcaggacgctggtggtagatcacatcgaccatgggacggccattgccaagaag
tacaatcagtcgctaaggatcgtgaccctggaaggcgaactgattaatccgggaggctcc
atgaccggaggcgcattcaagaactccagcaacctgcttagcaggcggcgggagattgaa
gaattcgaaaagacggtcaagcagctgaaacgggaaatggatgagatggaagcctcctcg
gaacgcttgcggagggaacgggccggatattatgagaagatggatgagatcagcggcaag
ctgcagagagattatgtcattcagaatacggctaagatgaatgccgaacaggctttggca
aagatcaagaatgctaaagagatgtccgagacggcgcagaaggaagcagacgagctggat
gcgcagattacggatatcatagataaccaggaatccatcaatgtagaactggatacatcc
gagacgctggaacaggaactgacccggcagattgaagcagagcaggaagtactgaatgga
gtacacgaggaggaggccgggaagcttaagagcaatgaggcgattcatctggaatttgca
agcttggagcagaagttcacgtttgtgatggagaatacctcgcgtatccgggaagagatt
gaaaagttccagtcagaacttgcaggactggaagaaagcaaaggcgggacatccaaagag
atcgaggataaagaaagccggattgcggacctgcggcagacgattgaggattctaaggat
ctgtttgccgagattcagttggagattgaaaagttcaagcaggaacgggaggacttgaat
caaaagcacaaagtattcctacagaaacgggaagacctgtcgaagcatatgtctgacctt
gacaaggaaatcttccgtctggacagccagaaggaaggctacgaggcagcctcggagaag
cagatcaattacatgtgggaagaatacgagatcacatttaaccgcgcaagagaactgcgg
gatacaaaccttacagacttgtcaaagatgaagaagcgcatcctggaactcaaaagcgag
atcaaagggcttggcaatgtcaacgtcaatgcgattgaagaatataagaatgtatctgac
cgctatgaattcctgaaaggccagcatgatgacctggtggaggcagaggctaccctggag
cagattatagaagaactagatattgcaatgcgcaagcagttccaggagcaattccagctg
atcgcgaaagaattcgataccgtatttaaggaactgttcggaggcggaaaaggaacgctg
gaactgatggaagatgaggatatactggaagcgggcatacggatcattgcccagcctccg
gggaagaaactgcagaacatgatgcagctctccggcggcgagaaggccttgacagccatt
gccctgctttttgcgatccagaacctgaagccatcgccgttctgccttctggacgagatc
gaggcggcgctggatgacaacaatgtaggcaggtttgcccagtatctgcataaattgacg
aaaaatacacagtttattgtcatcacccacagaaggggaaccatgacggcggccgacagg
ctatatggaatcaccatgcaggagaaaggcgtatccacgctggtatccgtaagcctgctg
gaagacgaattagatcaatag
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integrated database retrieval system
