Clostridium scindens: HDCHBGLK_03095
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Entry
HDCHBGLK_03095 CDS
T06591
Symbol
alaS_1
Name
(GenBank) Alanine--tRNA ligase
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
csci
Clostridium scindens
Pathway
csci00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
csci00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HDCHBGLK_03095 (alaS_1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
csci01007
]
HDCHBGLK_03095 (alaS_1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csci03016
]
HDCHBGLK_03095 (alaS_1)
Enzymes [BR:
csci01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
HDCHBGLK_03095 (alaS_1)
Amino acid related enzymes [BR:
csci01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
HDCHBGLK_03095 (alaS_1)
Transfer RNA biogenesis [BR:
csci03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
HDCHBGLK_03095 (alaS_1)
Prokaryotic type
HDCHBGLK_03095 (alaS_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
tRNA_SAD
DHHA1
HALZ
Fungal_TACC
bZIP_1
ZapB
tRNA-synt_2e
ADIP
ATG17_like
DivIC
YabA
Motif
Other DBs
NCBI-ProteinID:
QBF75684
UniProt:
B0NAH2
LinkDB
All DBs
Position
complement(3020885..3023524)
Genome browser
AA seq
879 aa
AA seq
DB search
MQKYGVNELRKMFLEFFESKGHLAMKSFSLVPHNDKSLLLINSGMAPLKPYFTGQEIPPS
KRVTTCQKCIRTGDIENVGKTARHGTFFEMLGNFSFGDYFKKESIRWTWEFLTDVVGLDP
DRLYPSVYLDDDEAWEIWNKDIGIPAERIFRFGKEDNFWEHGSGPCGPCSEVYYDRGEKY
GCGSPDCTVGCECDRYMEIWNNVFTQFDNDGNNNYTELEQKNIDTGMGLERLACIVQEVD
SMFDIDTMKALRDHVCRLAHAEYGRDEETDVSLRVITDHIRSVTFMISDGIMPSNEGRGY
VLRRLLRRACRHGRLLDIPGEFLVELAQNVIEGSKDGYPELEEKKEFIFKVIAKEEEQFN
KTIDQGLSILSDMVAETEKKGEKTLDGQNAFKLYDTYGFPLDLTKEILEEKGMSVDEKGF
KEAMEIQRKTAREAREVTNYMGADVTVYESIDPSITTEFVGYDNLSYESEVTVLATDTEL
VDALSDGERGTIFVEKTPFYATSGGQEADKGIIRTADGEFIVEDVVKLMGGKFGHIGHVS
KGMIKVGDKAALEVDTDNRMLSANNHSATHLLHKALRMVLGNHVEQAGSSVNADRLRFDF
THFSALTEEELKKVEAIVNEQIMNCLNVKVQNMPIEEAKKTGAAALFGEKYGSIVRVVSM
GDFSIEFCGGTHVANTGVITAFKILSETGVAAGVRRIEALTSKGLLKYYDELEEKLHEAA
KLLKAAPDKLTDKISHLQAENKALHSEVESLKSKLAQDAMGDVMDQVVEVKGVKLLATKV
EDVDMNGLRDLGDQLKKKLGEGIIVIASATDGKVSLMATATKGAIDKGAHAGNLIKAIAG
LVGGGGGGRPNMAQAGGKNPAGMDEAIAKAAEVLEGQLA
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaatacggagtaaatgaattaagaaagatgtttcttgaatttttcgagagcaag
ggacatctggcaatgaaaagtttttcgctggtgccccacaatgataagagtctgttgctg
atcaactcaggcatggcgccgctgaagccatattttaccggacaagagattccgccgagc
aagcgggtgaccacttgccagaagtgcatccgcaccggggacattgagaatgtaggaaag
acggcccgtcatggcacgttttttgagatgcttgggaacttttcgttcggagattacttt
aagaaggagtctatccgctggacgtgggaattccttacggatgtcgtcggactggatccg
gacaggctctatccctccgtgtatctggatgatgatgaggcatgggagatctggaataag
gacattggaatcccggccgagagaatcttccggttcggaaaggaagataatttctgggag
catggctcaggcccctgcggaccatgttccgaagtatactatgacagaggggaaaaatat
ggctgcggcagccctgactgtacggtgggctgcgaatgcgaccgttatatggagatctgg
aacaatgtctttacgcagttcgacaatgatggcaataacaattacacggaattggaacag
aagaatatagataccggtatggggctggaacgtctggcctgtatcgtgcaggaagtagac
tccatgttcgacattgacaccatgaaagccttaagggatcatgtctgccgactggcccat
gccgaatatggcagggatgaagagacggatgtctccctgcgtgtcatcaccgaccatatc
cgttccgtaacctttatgatctctgacggaatcatgccttccaacgagggccgtggatat
gtgctaaggcgtctcctgaggcgtgcctgcaggcacggaaggctgcttgacattccggga
gagttcttggttgaactggcacagaatgtgattgaaggctccaaggatggatatcccgaa
ctggaagagaaaaaggaatttatcttcaaggtaattgccaaggaagaagagcagtttaac
aagaccattgatcagggactgtccattctgtccgatatggtggcggagacagagaaaaag
ggggaaaagaccctggatggccagaatgcgttcaaactttatgatacctacggattcccg
ctggatctgacgaaggagatcttggaagagaagggaatgtctgtcgatgaaaaaggcttc
aaagaagccatggaaatccagaggaagacagcccgcgaggcccgtgaagtcaccaactat
atgggggcggacgtgacggtatacgagtccatcgatcctagcattaccacggaattcgtc
ggctatgacaatctttcttatgagtccgaagttacggtgctcgccacggatacggaactg
gtagacgcgctttcggatggcgagcggggaactatctttgtggagaagaccccgttctat
gccaccagcggcggccaggaggcggataagggaatcatccgcaccgcggacggcgaattc
atcgtggaggatgtggtaaagcttatgggcggcaaattcggccatatcggccatgtatca
aagggcatgataaaggttggagacaaagcagcgctggaagtggatacggataaccggatg
ctttctgccaataaccacagcgcgacccatcttcttcacaaggcgctgcgcatggtcctg
ggcaatcatgtagagcaggccggatcctccgtcaatgcggacaggctgcgttttgacttt
acgcatttttctgcccttacggaggaagaattaaagaaggtggaagcaatcgttaatgag
cagatcatgaactgcctgaacgtaaaggttcagaacatgcccatcgaggaggcgaaaaag
actggcgcggctgcgcttttcggagagaaatacggcagcatcgtccgcgtggtaagcatg
ggagacttttccatcgaattctgcggcggcacacatgtggcgaatacaggcgtcattact
gccttcaagattctttccgagacaggtgtcgcagcaggcgttcgaaggattgaggcattg
acatccaaaggacttttaaaatattatgacgaactggaagagaaacttcacgaggcagcg
aaactgttaaaggccgccccggataaactgacagataagatttcccatcttcaggcggaa
aataaagcgctccacagcgaggtggagagtttaaagagcaagcttgcccaggatgccatg
ggagatgtgatggaccaggtcgtagaggtcaaaggcgtcaaactccttgcgacaaaggtg
gaggatgtggacatgaatggcctgcgcgaccttggagaccagctgaagaaaaaactaggc
gaaggcatcatcgtgatcgcgtcagcaaccgacggaaaagtaagcctgatggccacagct
actaagggagccatcgacaagggagcccatgcaggaaaccttattaaggcaattgccggc
cttgtaggcggtggcggcggcggacgcccgaacatggcccaggctggcggcaagaatcct
gcaggcatggatgaagcaatcgcgaaagccgcagaagttctggaaggccagctggcgtaa
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