Clostridium scindens: HDCHBGLK_03189
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Entry
HDCHBGLK_03189 CDS
T06591
Symbol
pbpA
Name
(GenBank) Penicillin-binding protein A
KO
K05364
penicillin-binding protein A
Organism
csci
Clostridium scindens
Pathway
csci00550
Peptidoglycan biosynthesis
csci01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csci00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HDCHBGLK_03189 (pbpA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
csci01011
]
HDCHBGLK_03189 (pbpA)
Peptidoglycan biosynthesis and degradation proteins [BR:
csci01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
HDCHBGLK_03189 (pbpA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer_2
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
QBF75778
UniProt:
B0ND48
LinkDB
All DBs
Position
complement(3113919..3115250)
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AA seq
443 aa
AA seq
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MGYITYFQVARSRDIIRSPYNARQDSYADRVVRGKILDKEGNVLAQTNVSEDGTETREYP
YGNMFAHVVGYSVQGKSGLESVENFELLTSNAFFLEKIKNEFQDKKNMGDSVVTTLNLEL
QEAAYDALGNYKGAVVVMEPSTGKILAMVSKPDFDPNTVAENWDFLNTDQDSVLLNRATQ
GQYAPGSTFKVVTALEYMRENPDYENYGYNCTGAIEKDGVTIRCYNGHVHGQVGFQDSLA
YSCNTSFSNIGLSLDIKNFRETSKELLFNSKLPSVLPYSKSSFSLEPGAGSADKMMTAMG
QGKTQVSPYHMALITSAIANGGTLMKPYLVDSVTNYTGAVIDKNKPEKYKSLMTSEDAAK
LKQYMSAVVDYGTASVLSGQSYTAAGKTGTAEYSSDKEKDHSWFIGMTNVDNPELVISVI
IESSDGTAKAVDVAKQVFDAYYY
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgggctatatcacctatttccaggtggcaagaagccgggatatcatccgaagcccttat
aatgcaagacaggattcttatgctgaccgggtagtaagggggaagatcctagataaggaa
ggcaacgtgctggctcagacgaacgtatcagaagacggcacggagacgagggagtatcct
tacggaaacatgtttgcccatgtagtaggatacagcgtgcagggcaaatcaggcctggaa
tctgtggagaactttgaacttctgacttccaatgcgtttttcctggaaaagataaagaat
gaattccaggataagaagaatatgggcgatagcgtggtgaccactttgaatctggaactt
caggaggctgcctatgatgccctcggcaattacaagggagccgtggtggtgatggagccg
agcacaggaaagatcctggccatggtctccaagccggactttgatcccaataccgtagct
gagaattgggatttcctgaatactgatcaggacagcgtgcttttgaatcgtgctacacag
ggccagtatgcgccgggatctacattcaaagtggttacggcccttgagtatatgagagag
aatccggattatgaaaattatggctacaactgtaccggggccatcgagaaggatggggtg
accatccgctgctacaacggacatgtacacggccaggtaggcttccaggacagtctggcc
tactcctgcaatacctctttttccaacatcggtctgtcattggacattaagaattttaga
gagacatccaaagaactgctgtttaattccaaacttccttccgtgctgccttacagtaag
agttccttctcgctggagccgggggctggaagcgctgataagatgatgaccgccatgggg
cagggaaaaacccaggtcagcccgtaccatatggctctcatcacttctgctatcgccaac
ggaggaaccctgatgaagccgtatctggtagattccgtcaccaattataccggtgcggtc
atcgacaagaataagccggaaaagtataaaagcctgatgacttctgaggacgcggccaag
cttaagcagtacatgtcagccgtagtggactatgggaccgcatccgtcttgagcgggcag
agttatacggccgccggaaagacgggaaccgcagaatacagttcggataaggaaaaggat
cactcctggtttatcggaatgaccaacgtggacaacccggaactagtcatcagcgtgatc
attgagtcatccgacgggaccgccaaagcagtcgatgtggcgaaacaggtatttgatgcc
tattactattag
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