Clostridium scindens: HDCHBGLK_03276
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Entry
HDCHBGLK_03276 CDS
T06591
Name
(GenBank) Long-chain-fatty-acid--CoA ligase FadD15
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
csci
Clostridium scindens
Pathway
csci00061
Fatty acid biosynthesis
csci00071
Fatty acid degradation
csci01100
Metabolic pathways
csci01212
Fatty acid metabolism
csci02024
Quorum sensing
csci04146
Peroxisome
Module
csci_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
csci00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
HDCHBGLK_03276
00071 Fatty acid degradation
HDCHBGLK_03276
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
HDCHBGLK_03276
09145 Cellular community - prokaryotes
02024 Quorum sensing
HDCHBGLK_03276
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
csci01004
]
HDCHBGLK_03276
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csci04147
]
HDCHBGLK_03276
Enzymes [BR:
csci01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
HDCHBGLK_03276
Lipid biosynthesis proteins [BR:
csci01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
HDCHBGLK_03276
Exosome [BR:
csci04147
]
Exosomal proteins
Exosomal proteins of breast milk
HDCHBGLK_03276
Exosomal proteins of breast cancer cells
HDCHBGLK_03276
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
QBF75864
UniProt:
B0NCW0
LinkDB
All DBs
Position
complement(3196591..3198243)
Genome browser
AA seq
550 aa
AA seq
DB search
MGQKIIYNQVTEYQTLPQCLMDVEQRHRGKSVITTYDLKGQAHSVKFEEFVADVRALAGS
LLTKKLAKKHVAIVGENSYEWVVVFCAVGCIGGVAIAVDIDQAGDEILAMTEFADACCVF
VDAAFLDVFKESQMQYVIMRGEGAENSYHHLLKEGEKLKKKNQWKDFSFCPQVEKDDPLA
IVYTSGTTSVSKPVVLSQYNMMFNACHTQSLVKVGERLFNPLPLYHTYSLVCGVLDGISQ
GADICMNTGLKTLMRDLRLYEPDTLVAVPMIMENLLKEVHRRQEIAGTREQAMQAVEKYT
RRKKMHLPCSPYQEQALEQLVGPNLKFIPCGGAQLSVKVAEELQAYGVGVYQGYGITECS
PLIGSNMNKKNNPASVGFPIPQTQIRLDDGEILVKGPSVFKEYYKNSLLTEESFTDEWFH
TGDIGYKDRKGYLHICGRKKNLIVFSNGKKVVPEELEGYIQEIPLVKEVMVYGASAGNAI
DDVTLSALICIDEERADTNDTFQLLEQVQEEITKLNNRLPDYKRIQSVKLTESEFKKTSI
QKKKRREVTG
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgggacagaaaatcatttataaccaggtaacagaataccagacgctgccccagtgcctg
atggatgtagaacagaggcaccgtggaaaaagcgtaatcaccacctatgacttaaaagga
caggcgcacagtgtgaagttcgaggaattcgtagcagacgtgcgggcattggccggttcg
ctattgacgaagaaactggccaagaagcacgtggccatcgtaggggagaattcctatgaa
tgggtggttgtcttttgcgcagtaggctgcattgggggcgtagccatcgcagtggacata
gaccaggccggggatgagattctggcaatgacggaatttgcggatgcctgctgcgtgttt
gtggatgcggcattccttgatgtatttaaggaaagccagatgcagtatgtcatcatgcgc
ggcgaaggagcagagaattcctatcaccacctgcttaaagaaggggagaaactgaaaaag
aagaatcagtggaaagacttttcattctgcccgcaagtggaaaaagacgatccgctggct
atcgtctatacgtcaggaaccaccagcgtatccaagccggtggtgctgtctcagtacaac
atgatgttcaatgcctgccatacccagtcgctggtgaaggtgggagagcggctgttcaat
ccgctgcctctatatcatacttactccctcgtgtgcggagtgctggacgggatatcacag
ggggcggatatctgcatgaatactgggcttaagacgctgatgagggatctaaggctctat
gagccggatacactggttgcagtgccgatgattatggaaaatcttctgaaagaagtgcac
cggcgccaggaaattgccggtaccagggaacaggcgatgcaggcggttgaaaagtatacg
agaaggaagaaaatgcatcttccatgcagtccgtatcaggagcaggcgctggagcagctg
gtagggccgaaccttaagtttatcccctgcggtggcgcccagttaagcgtcaaggttgcc
gaagaactgcaggcgtacggtgtcggagtctaccagggatatggaattacagaatgcagc
ccgctcataggcagcaatatgaataaaaagaataaccccgcttctgtgggatttccgatt
ccgcagacgcagatccggctggatgacggagagattctggtaaaaggcccatctgtcttt
aaagaatattataagaattccctactgacagaggagagttttaccgatgagtggttccat
acgggagatatcggctacaaggacagaaaaggctatcttcatatctgcggaagaaaaaag
aacctgattgtattcagcaatggcaagaaggttgtgccggaagaactggaaggatatatc
caggagattcctttggtcaaggaagtcatggtatatggggcatcggccggaaacgccata
gacgatgtcaccttgtccgcgctcatctgcattgatgaggaacgggctgacacgaatgat
accttccagctgctggaacaggttcaggaggaaattacaaaactgaataaccggcttcct
gattataagaggatccagtcagtcaagcttacagagtcggaatttaaaaagacatccatt
cagaagaaaaaacgcagggaggtgacgggatag
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