Clostridium scindens: HDCHBGLK_03279
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Entry
HDCHBGLK_03279 CDS
T06591
Symbol
srfAA
Name
(GenBank) Surfactin synthase subunit 1
Organism
csci
Clostridium scindens
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Condensation
AMP-binding
NAD_binding_4
PP-binding
AMP-binding_C
Epimerase
3Beta_HSD
GDP_Man_Dehyd
Polysacc_synt_2
RmlD_sub_bind
NmrA
McdB
Motif
Other DBs
NCBI-ProteinID:
QBF75867
UniProt:
A0A494WQB4
LinkDB
All DBs
Position
complement(3201636..3208991)
Genome browser
AA seq
2451 aa
AA seq
DB search
MERRRENERTPVDFFPLSYSQQNIWNLESAHPGLPMNNICTALKIEGNLNIEYLQRCIEL
AYKAFPTLRLRITVRDGRPCQYISEEIPGRAEFFDFTGTNEQGIDTWYQSVAREHFTLCD
SPLCQMLIFKRSDSSGGILTRVHHIVADAWSHALVTNHIIYNYFQLLQDKETQCQIAPDY
RLHIESEQKYRQSKVYQRDRDYWKEQLRDILPALAKEHQCAHISPVGLRRSYPLPGRLNR
MIARYCQQEKVSPFAVFYMALAIYLRRVRGQARFCIGVPTINRLNYKEKQSGGMFVNTLP
FVNELDTASTWNEFNDKLKDDWFHLLYHQRLPFEDIKKLANTGNEVASDQLFEIALSYQN
GKMDHLRGARVTLEGRWMYCGYQSETLCIHLSSRDASNQFVVDYDYLTQIFSASEIDALH
GRLVKILKEALKNPDLPVGELPILEEEEEERVIFDFNKTNAWYDRNAGIGTGLLEAAREN
EGKIALICRGKRISYEQLMNDAALIAGGIRQFLPEGRHTVALLSRREEGLLAALCGIILS
GNSWVLMDPAQPQRRIADLLKDSQAALCITDDSLAWAGTDIATRTLKELHGSQKIEILPP
EEKPSDLAYLVYTSGTTGSAKAVEVEQHSVMNLKEAIKDLYPKGAVLSICNVGFDAFLLE
SVIALLNGATIVMATEEEMNDAQKMGRLIMDYDVGFMALTPSRLKAYQNDQVFLRSLSHI
ETLICGGEVLVPDTYLKLRDYTPATLYNQYGPSEATVAVSHAAVDGKGQVTIGRPLANCR
IYILDENRNALPVGSAGELYIGGECLARGYHNREELTRERFVEDPFMEGQRMYRTGDIGK
WTEDGSILYLGRNDSQVKLLGHRIELAEVESVLGRHPLVNAVAVTVYENQLIAYYMAKEG
LEGEALLSYGALYLPRYLQPVYAARVEELPVTGNGKIDVGRLPKPELPDMEEAPADEWEE
KILAIWQRILEKPGLGIHSDYFLSGGDSLNAVFMLTETEKEFGKVIQIQDLYANSTVRRF
ACLLRGAGIEDSILKGRRIPKARERGWYPPTPVQSGFFVMHSQDATKVGYNMPAAFKASA
WLDFGRLEQAAARMIEEDELLRTQFEMQEGKLIARVSSQADFQLEWMECGRIEEAMERFV
RPFDLGKAPLFRAAMVKAEGNEPYIIIDMHHIISDGISSQIIFERLHDYYCQKEVHLPEL
SYVDFAWWVNENMETAGVKCREYWKKILPEKIPKSAFVPDRPRPSEFDGAGGRYGFELPE
ELDESLKMYCKDKKITPYMFLLGVFAMMQGRFACENTAAIGSPFSGRRNPGLEKMTGVFV
NTLPIFLDVEGSQTIEDYFGKVRKMVAGIQDYQDISLEEIIGLAHEQRQQGRNPLYSTLF
SLTPVSRLTTVLGEAELSYVPYDTHSVKIDLHLEATCIDGHYRFAMEYAACLFDEVTAAF
YGRCLIQGIRAVLNGGVSMVGDIPWLGYEDRLRLVEQPNRMRTPYDCATVDQAMDDMAYL
MPDKRAVEWGEGRHYTFRQLKERSDNLAAMLLVKGVLPGDKAAFLTRRNGDMLVMMFGIL
KAGAAYVPVDPAFPKERIRYMLRQADVKVAVYDRETEPFEDIPCQVLRYEGPQEVTRTAL
PVNSPEDVANVIFTSGSTGKPKGVMMLHKSLSNLMAHLDPLLGGQEQKILCASNCVFDVF
TTETILASAKGHGISIADEEEMMLPWKMAERIRTDKVSILQLTPSRILMCMNDESFCKAL
ADIQIIILLGEPWTMELKDRLCALTEARIFNIYGPTETSVHNCQGEIRMERSIHIGKPIG
NCRYYLLDEEKKPVLPTSVGEIYIAGECLSAGYINQPELTSEVFVPDIQNPKEKMYKTGD
RGRQRADGNWQCIGRVDTQLKLNGHRIEPVEIATVMLQSGLAKEAAVVPIMKDGIPRFLR
GAVVPKKEYQEKEMRAYLKDRLPDYMLPSEIILLDELPRTASGKTDLKLLAAMEKKEKVW
EALPAANQEACETMEVTEEGALTAIWSEVLGKDPDPEVSFFQQGGTSLTAIIILNQYHQR
QLAFSINDFYHYPSLREQIDRLCKRQEGIEEKKAAGNIPELARLPRYLPEVKSIPVKEGA
ALVTGATGYLGSYLVKELADAGKKACCLVRGDEKRLFDSLRWHFGPEFCREHQHLLIPVV
GSLTQEHFGLDDENFARLADEVAVVYHCAADVRHFAPEDELLKTNVTGTKRAIEFAREAR
ASYMHISTVSVAGEYLLDAPQAKAIFEEQDLDVGQNWMENPYTMSKMLAEYEVTKAQEEG
LAARIFRVGRVVCNSYSGKFQKNQESNAYYRLIKGLLEFGKMPEELRDTGLETTYVDLAA
KAIVGLSEETGGAFHIFNPKEISIREILDACGEIQTVGRREFERELEIAGTSSDSPYVQA
FAQSWFSGELAASHMIMDCRRTREALAKIGFYWPKPDPEILKICFMESRGE
NT seq
7356 nt
NT seq
+upstream
nt +downstream
nt
atggagagacgaagagaaaatgagaggacgccagtagatttctttcctttatcatacagc
cagcagaatatctggaacctggaatcggcacatccaggcctacccatgaataatatctgc
acggcacttaagatagaggggaatttgaatattgaataccttcagagatgtatagaactt
gcatacaaggcatttccaaccctgcggcttagaattaccgtaagggatggcagaccgtgc
caatatatctcggaagagattcccgggagagcggaatttttcgattttacaggaacgaat
gaacaggggattgatacctggtatcagtctgtggcaagagaacattttacgctatgtgat
tctccgctgtgtcaaatgcttatatttaagcgatcagacagttcaggcggaatattgaca
agagtccatcatattgttgcggatgcatggtcgcatgctcttgtgacaaatcatattatt
tataactattttcaactattgcaggataaagagacacagtgtcagattgcgcctgattac
aggcttcatattgaatctgaacagaaatataggcagtcgaaggtttatcagagggaccgg
gattactggaaggagcagttaagagatatcttgccggcactggcaaaggagcatcagtgt
gcccatatcagcccagtgggacttcgcaggtcctatccgcttcccggccgtctgaaccgc
atgatcgcaaggtattgccagcaggagaaggtttccccgtttgcagtgttctatatggct
cttgccatctacttgagacgggtaaggggacaggcgaggttctgtatcggggttcctacg
atcaacaggctgaactacaaggaaaagcagtcaggaggaatgtttgtcaatacgcttccc
tttgtaaatgaactagatacggcatctacctggaacgagttcaatgataagttaaaagac
gattggtttcatctgctgtaccatcagaggctgcctttcgaggacattaagaaattggct
aacacgggaaatgaagtggcatcagaccagctgttcgagatagcgctttcttaccagaat
ggcaagatggatcatctaagaggggcccgcgtgacgctggagggccgatggatgtactgc
ggctaccagagcgagaccttgtgcatccacttaagcagcagggatgccagcaaccagttc
gtagtggattacgattacttgacccagatattctctgcgtctgagattgacgcgctgcat
ggccgcctggtaaagatcctgaaagaggcgctgaagaatccggacctgcctgtgggcgaa
cttcccatcctggaagaagaggaggaagaacgtgtaatctttgactttaataaaaccaat
gcctggtatgacaggaacgccgggattggaactggtcttctggaagcagcaagagagaat
gaaggaaagatcgcgctgatctgcaggggaaagcggatttcttatgaacaactgatgaat
gatgcggcccttatcgcaggaggaatccgacagtttttgccggaaggcaggcataccgtt
gccctgttgtcacggcgggaggaagggctgcttgcagccttgtgcggaatcatcctgtcc
ggcaacagctgggtgctgatggaccccgcgcagcctcagagaaggatcgcggacttgtta
aaagacagtcaggcggcgctttgtatcaccgacgattctctggcctgggctggcacggat
atagcgacaaggactctgaaagaattgcatggcagccagaagatagagattcttccgcca
gaggaaaagccgtcagacctggcataccttgtgtatacttccggaaccacggggagcgcc
aaagccgtggaagtagaacagcacagcgtgatgaatctaaaggaggctataaaggatctg
tacccaaagggggcagtactgtctatctgcaatgtggggtttgacgcatttctgctggag
agcgtcattgcgcttctgaatggagccaccatcgtgatggccacggaagaagagatgaat
gacgcgcagaagatgggaaggctgatcatggactacgatgtaggattcatggcattgact
ccttccaggcttaaagcctaccagaatgatcaggtatttctgcgctccctgtcccatata
gagacgctgatctgcggcggggaggtcctggtaccggacacttatcttaaactgcgggat
tatacgccggcaaccctttataaccagtatggtccttcggaggcaaccgttgctgttagc
catgcggcagtggacggaaaagggcaggttacgatcggacgcccccttgctaactgcagg
atctatattctggatgaaaacaggaatgcgcttccagtgggatctgccggagaattgtat
attggcggggaatgcctggcgcgagggtaccataaccgggaggaactgaccagggaacgc
ttcgtagaagatccatttatggaagggcagcgcatgtacaggacgggcgacatcggaaaa
tggacggaagatggaagtatcctgtatcttggccgcaatgacagccaagtgaaactgctg
ggacatagaatcgaactggcggaggtagagtccgtattagggaggcatccgctggtaaac
gcggttgcagtgaccgtatacgagaaccagctgatcgcctattatatggcgaaagaggga
ctggaaggggaggcccttctttcctatggagctctttatctgcctaggtatctgcagccg
gtatatgctgcaagggtagaagaattgccggtgaccggtaatggaaagattgatgttgga
aggcttccgaagccggaattacccgacatggaagaagccccggctgatgaatgggaggaa
aagattcttgccatctggcagcggatattagaaaagcccggccttggcattcattcggat
tatttcttgtccggaggggattccctgaatgcggtatttatgctgaccgagacagagaaa
gaattcgggaaagtgattcagatacaggatctgtatgccaatagcacggtgagaaggttt
gcctgcctccttcgcggagctggtattgaagatagcatcctaaaaggccgcaggattccg
aaggcaagggagagaggctggtatccgccgactccggtacaatccggattcttcgtaatg
cacagtcaggatgccacaaaggtaggctacaatatgccagcagccttcaaggccagcgcc
tggctggactttgggcgcctggagcaggcagcggcccggatgatagaagaggatgaattg
ctgcggacacagtttgagatgcaggagggaaaactgattgccagggtaagcagccaggct
gactttcagttagaatggatggagtgcggccgcatagaagaagccatggaacggtttgtc
cggccgtttgatctgggaaaggcgccgcttttcagggcagcaatggtgaaggcggaagga
aatgagccttatatcatcattgacatgcaccatattatatcggacggaatcagcagtcag
atcatatttgagcgtcttcatgactactattgccagaaggaggttcatctgcccgaactt
tcctatgtagactttgcgtggtgggtaaatgaaaatatggagacggccggagtaaaatgc
agagaatactggaagaagattcttccagagaaaattccaaagagcgctttcgtgccggac
aggcccaggccttccgaattcgacggggccggaggcagatatggatttgaactgccggaa
gaactggatgagagccttaagatgtattgtaaggataagaagattacgccctatatgttc
ctgctgggagtattcgctatgatgcaggggcgttttgcctgcgaaaataccgcggccata
ggctctccattttcaggaaggcgtaatccgggacttgagaagatgacgggcgttttcgtc
aatacgctcccaatcttcctggatgtcgaggggagccagacgatagaagattactttggg
aaggtcaggaaaatggttgcaggaattcaggattaccaggatatttccttggaagagata
attggcctggcccacgagcaacgccagcagggacgcaatccgctgtatagcacgctattc
agcctgactcctgtatcacggcttacaacggtcttaggcgaggcagaactttcctatgtg
ccttatgacacgcattcggtcaagatcgacttgcatctggaggctacctgtatagacggt
cattatcggttcgcgatggaatatgcggcctgcctgttcgatgaagtgacggctgcattc
tatggaagatgcctgatccagggaatacgcgcagtccttaatggaggcgtatccatggtg
ggagacattccatggcttggatacgaggatcggctgaggcttgtagaacagccaaaccgt
atgcggactccctatgactgcgccactgtagatcaggcaatggatgatatggcatatctg
atgccggacaagagggccgtggagtggggagaaggcaggcattataccttccggcaattg
aaggagcggtcggataatctggcagctatgctgcttgttaaaggagtcctgccgggagat
aaggcggcatttttgaccaggcgaaatggcgacatgctggtaatgatgtttggaatcctg
aaggctggggccgcatatgttcctgtagatccggctttcccaaaggaacggatacgatac
atgctcaggcaggcagacgtgaaagtggccgtgtatgacagggagacggagccgtttgag
gatataccctgccaggtcttaagatacgaagggccgcaggaggtgacaagaacagcgctt
cccgtaaactctccggaagatgtagcaaacgtcatcttcacgtccggatctaccggaaag
cccaaaggggtaatgatgcttcataagtccctgtccaacttgatggcgcatttagatccg
cttctgggaggacaggagcagaagattttatgtgcatccaactgcgtatttgacgtattc
acgacggagaccatcctggcatccgcaaagggacacggaatcagcattgccgatgaggaa
gagatgatgcttccatggaagatggccgaaagaatccgaacagacaaggtttccatattg
cagctgactccgtcaaggatattgatgtgcatgaacgatgaaagtttctgcaaggcattg
gcggacattcagatcatcatcctccttggagagccatggaccatggaactaaaagaccgg
ctctgcgcccttactgaagcgcggatattcaatatctatggacctacggagacttcggtg
cataactgtcagggagagatccgtatggagcgcagcattcatatcgggaagccgatcggg
aactgccgctattatcttctggatgaggagaaaaagccggtgcttcccacctcagtggga
gagatctatattgccggagagtgcctgtcggccgggtatatcaaccagccggaactgacc
agcgaagttttcgtcccggatatccagaatccgaaggaaaagatgtataagaccggggat
cggggaagacagcgggctgatggaaactggcagtgtatcgggcgggtggatacccagctg
aagttaaatggacacaggattgagccagtggagattgcaaccgtcatgctccaatccggg
ctggctaaggaggcagcggtggttcccatcatgaaggatggaattcccagattccttaga
ggcgcggtggttccaaagaaggaataccaggagaaggagatgcgcgcttatcttaaggat
cggcttccggactatatgcttccttccgaaatcatccttttggatgaactgccaaggacg
gccagcggaaaaacggatttaaaactgcttgctgctatggagaagaaagagaaggtatgg
gaggcattgccagcggccaaccaggaggcctgcgagacgatggaggtgacagaagaaggc
gcgctgactgcaatctggagcgaggttctgggaaaggatccagatcctgaagtatccttt
ttccagcagggagggacctcccttacggcaattattatattgaatcagtatcatcagaga
caattggcattttccatcaacgatttctatcattatccgtccctgagagagcagattgac
aggctgtgcaaaaggcaggaggggatcgaagaaaagaaggcagcggggaatatccctgaa
ctagccaggctccccaggtatctgcctgaagtgaaaagcattcctgtaaaagaaggcgcg
gcgctggtcacaggggcaaccggatatctgggaagctatctggtcaaggaactggcggat
gccgggaagaaggcctgctgcctggtaagaggcgacgagaaacggctgtttgattcattg
cggtggcatttcggccccgaattctgccgggagcatcagcaccttctgattcctgtagtc
ggcagcctcacccaggaacatttcggactggatgacgagaacttcgcaaggcttgcagac
gaggtggccgtggtatatcactgcgcggcggatgtcaggcatttcgcgccggaggatgaa
ctgcttaagaccaatgtgacaggaaccaaaagagccatagaattcgcaagggaagcccgc
gcatcttacatgcatatctctacagtgagcgtggcaggggaatatctgctggatgcgccg
caggcaaaggccatctttgaggaacaggatctggatgtaggccagaactggatggagaat
ccgtacaccatgagcaagatgcttgccgagtatgaggtgacgaaggctcaggaagagggg
ctggcggccagaatattccgggtaggaagagtggtatgtaattcttactcagggaaattc
cagaaaaaccaggagagcaatgcatattaccgactgataaagggattactggaattcgga
aagatgccggaggaactaagagatacagggctggagaccacctatgtggatctggctgcc
aaagccattgtaggactctcagaagagacaggaggagcattccatatatttaatccgaaa
gaaatatccatccgggagatactggatgcctgcggggagattcaaacggtaggacgccgg
gagttcgagagggaactggagatcgcaggaacttcgtcggattcaccttatgtgcaggcg
tttgcgcaaagctggttctcgggcgaactggccgcctcccatatgatcatggattgcaga
aggacccgggaggcactggcaaagatcggattctattggccaaagccggatccggagata
ttaaagatatgttttatggaaagcagaggtgagtga
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