Clostridium scindens: HDCHBGLK_03492
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Entry
HDCHBGLK_03492 CDS
T06591
Symbol
tetO_3
Name
(GenBank) Tetracycline resistance protein TetO
KO
K18220
ribosomal protection tetracycline resistance protein
Organism
csci
Clostridium scindens
Brite
KEGG Orthology (KO) [BR:
csci00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
csci01504
]
HDCHBGLK_03492 (tetO_3)
Antimicrobial resistance genes [BR:
csci01504
]
Gene variants
Tetracycline resistance genes
Others
HDCHBGLK_03492 (tetO_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFG_IV
EFG_III
EFG_C
MMR_HSR1
EF-G_D2
RF3_C
FeoB_N
AIG1
Motif
Other DBs
NCBI-ProteinID:
QBF76076
UniProt:
B0N9K5
LinkDB
All DBs
Position
3419474..3421393
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AA seq
639 aa
AA seq
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MKIINIGILAHVDAGKTTLTESLLYTSGAIAEQGNVDKGTTRTDTMILERQRGITIQTAV
TSFYWNDYKINIVDTPGHMDFLTEAYRSLSVLDGAVLVISAKDGVQAQTRILFHALQKMD
IPTIIFINKIDQNGIDLQCVYQSIKDKLTSDMIVMQEVSLSPKITMTDISDLDKWDMIIS
GSDELLERYVAEDSLDIQELQYEKCKRTRCCSLFPVYHGSAKDNLGTEKLIEAIIETFIT
ETDDIQSELCGYVFKVEYTERKKRLSYLRLYHGTLHLRDTLLLSKKEKIKITEMCIPSNG
EIVPADHACPGEIVILADDTLKLNDILGNEKLLPHKTRIDNPMPLLRTTVEPQKPEQREA
LLNALAEIADTDPLLHFDIDTVTHEIMLSFLGKVQLEVICSLLEEKYHVGVAMKEPSVIY
LERPQKKASCTIHIEVPPNPFWASIGLTVTPLPVGSGTQYKSEVSLGYLNQSFQNAVMEG
VRYGMEQGLYGWGVTDCQICFDYGVYYSPVSTPADFRFLAPVVLEQALKKAGTQLLEPYL
SFTLFAPQEYLSRAYNDAPKYCAIIESTRLEKDEVIFKGEIPARCIGEYRNDLNFYTNGR
SVCITELKGYQETSGEPVFQPRRPNSRLDKIRHMFQKIM
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataatcaatatcggcattctggcccatgtagacgcaggaaaaactacattgaca
gaaagtctgctatacaccagtggagcgattgcggaacagggaaacgtggataaagggacc
acaagaacagacactatgattttggaacggcaacggggaattaccattcagacagcggtt
acttctttttattggaatgattataaaatcaatatcgtggacactcccggtcatatggat
tttttaaccgaagcataccgctctttatctgtccttgacggagctgttttagtcatttca
gcaaaagacggcgtacaggcacaaacccgtatattattccatgcgcttcagaaaatggac
attccgacaattatctttataaataagatagaccaaaatgggatcgacctgcagtgtgtt
taccaaagcattaaagataaacttaccagtgatatgattgtcatgcaggaggtttccctg
tcgccaaagataaccatgaccgatatttctgatttagacaaatgggatatgattatttcc
ggaagcgatgaactattagaacgatatgttgcagaggattctttggatatacaggaatta
caatatgaaaagtgcaaaagaaccagatgctgctctttgtttcctgtttatcatgggagt
gcaaaagacaatttaggaacagaaaaactgattgaagcgattatagaaactttcattaca
gaaacggacgatattcagtctgaattatgtggatatgtttttaaggttgagtatacagag
cggaaaaaacggctttcttatttacgcctgtatcatgggacgctccatttacgggatacc
ctgctgctgtcaaaaaaggaaaaaataaagattacagaaatgtgtattccgtcaaatggt
gaaatcgtcccggctgaccatgcctgtccgggagaaattgttattttagctgatgatact
ttgaaactgaacgatatcctgggaaatgaaaaactcctgcctcacaaaacacggattgat
aatcccatgccattacttcggacaacggtagagccgcaaaagccggagcaaagggaagcc
ctgttaaatgccctcgcagagattgctgatacagaccctcttttgcattttgacattgat
actgttacccatgagattatgttatcttttttgggaaaagtacagttagaagttatttgt
tcgctattagaagaaaaatatcatgtgggcgtggctatgaaagagccttcggttatttat
ctggaaagaccgcaaaaaaaagcgagctgcacgattcatattgaagtgccgccgaatccg
ttttgggcatctattggtttgactgtaacaccgcttcctgttggaagcggaacacaatat
aaaagcgaggtatctctcggctatttaaaccaaagttttcaaaatgccgtcatggagggt
gtgcgttatggaatggagcagggcttatatggctggggagtgacagactgccaaatttgt
tttgattatggagtttattacagcccggtcagcacccccgctgattttcgttttcttgcg
cctgtcgtgttggagcaggcattgaaaaaagcagggacacaactgttggaaccatacctt
tcctttaccctttttgcaccgcaggaatatctttcacgggcttataatgatgcaccaaag
tattgcgcaatcattgaatcaaccagacttgaaaaagatgaagttatttttaagggtgaa
atccctgcccgttgtatcggtgaatataggaatgatctgaatttttatacaaatggaaga
agtgtctgcattacagaattaaaagggtatcaggaaacttccggcgagcctgtatttcag
ccacgccgcccgaacagccgtttagacaagatccggcatatgtttcagaagataatgtaa
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