Clostridium scindens: HDCHBGLK_03534
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Entry
HDCHBGLK_03534 CDS
T06591
Symbol
glyA
Name
(GenBank) Serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
csci
Clostridium scindens
Pathway
csci00260
Glycine, serine and threonine metabolism
csci00460
Cyanoamino acid metabolism
csci00630
Glyoxylate and dicarboxylate metabolism
csci00670
One carbon pool by folate
csci00680
Methane metabolism
csci01100
Metabolic pathways
csci01110
Biosynthesis of secondary metabolites
csci01120
Microbial metabolism in diverse environments
csci01200
Carbon metabolism
csci01230
Biosynthesis of amino acids
csci01240
Biosynthesis of cofactors
csci04981
Folate transport and metabolism
Module
csci_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
csci00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HDCHBGLK_03534 (glyA)
09102 Energy metabolism
00680 Methane metabolism
HDCHBGLK_03534 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HDCHBGLK_03534 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
HDCHBGLK_03534 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
HDCHBGLK_03534 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
HDCHBGLK_03534 (glyA)
Enzymes [BR:
csci01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
HDCHBGLK_03534 (glyA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
DegT_DnrJ_EryC1
VASP_tetra
Motif
Other DBs
NCBI-ProteinID:
QBF76118
UniProt:
B0N9E5
LinkDB
All DBs
Position
complement(3461330..3462565)
Genome browser
AA seq
411 aa
AA seq
DB search
MYDFDEIKKVDSEIADAIKKEMERQNSHIELIASENWVSKAVMAAMGSPLTNKYAEGYPG
RRYYGGCQCIDIVEDLARERAKKLYGCDYANVQPHSGAQANLAAFFAMLTPGDKVLGMNL
DHGGHLTHGSPVNLSGKYFEIVSYGVNNDGFIDYDKVREIALKERPKLIIAGASAYARTI
DFKRFREIADEAGAYLMVDMAHIAGLVAAGLHPSPIPYAHVTTTTTHKTLRGPRGGMMLW
NQEAQEMFNFNKAIFPGTQGGPLEHVIAAKAVCFKEALEPEFKEYQQQILKNAQALCKGL
MQRGVKIVSGGTDNHLMLVDLSKEEVTGKELEKRLDDAHITCNKNTIPNEPRSPFVTSGI
RLGTPAVTTRGMTEEDMDVIAECIFLVLKSEEDIGKARRMVAGLTEKYPLC
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgtatgattttgacgagattaaaaaggtagacagcgagattgcagatgcaatcaagaaa
gagatggaaagacagaattctcatatcgaattgattgcatctgaaaactgggtaagcaag
gcagttatggcagccatgggaagcccgctgaccaacaagtatgcagaagggtatccgggc
agaaggtattatggaggctgccagtgtattgatatcgtagaggatctggcaagagagcgt
gcgaagaaactgtatggatgcgactacgccaacgtgcagccgcactcgggcgcccaggcg
aatctggcagcgttttttgcgatgctgacgcccggagataaggttctgggaatgaatctg
gatcatggcggccatctgacccatggctctccggtgaacctttccggcaaatactttgag
atcgtctcttatggagtcaataatgatggctttatagattatgataaggtaagggagatc
gctttaaaagaacggccgaagctgatcatagcaggagccagcgcttatgcaaggaccatt
gattttaagcgtttccgggaaattgcagatgaggcgggggcttatcttatggtggatatg
gcgcacattgcaggccttgtggcagcagggcttcatccaagccccatcccctatgctcat
gtgacgacaaccacgacgcacaagacgctgagggggccaaggggaggaatgatgctttgg
aaccaggaggcgcaggagatgtttaactttaacaaggcaatattcccaggaacccaggga
ggcccgttggaacatgtaattgctgccaaagcggtatgcttcaaagaggcgttggagcca
gaattcaaggaataccagcagcagatcttgaagaatgcgcaggcgctttgcaaagggctg
atgcaaagaggcgtgaagatcgtatccggcggaacggacaatcacctgatgctggtagat
ctaagcaaagaagaggtgacaggaaaagaactggagaagcgtctggatgatgcgcatatc
acatgcaacaagaataccatacctaatgagccaaggtctccgtttgtgaccagcggcatc
aggcttggcacgccggcagtcaccaccagaggcatgaccgaggaagatatggacgttatt
gcagaatgtatcttccttgtgttaaagagcgaagaagatataggaaaggccaggagaatg
gtagcagggttgacggaaaaatatccattatgctaa
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