Chryseobacterium scophthalmum: ACLB9Y_02575
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Entry
ACLB9Y_02575 CDS
T11109
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
csco Chryseobacterium scophthalmum
Pathway
csco03420
Nucleotide excision repair
csco03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACLB9Y_02575
03430 Mismatch repair
ACLB9Y_02575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csco03400
]
ACLB9Y_02575
Enzymes [BR:
csco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACLB9Y_02575
DNA repair and recombination proteins [BR:
csco03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACLB9Y_02575
MMR (mismatch excision repair)
Other MMR factors
ACLB9Y_02575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
ResIII
Motif
Other DBs
NCBI-ProteinID:
XMO02515
LinkDB
All DBs
Position
591337..593670
Genome browser
AA seq
777 aa
AA seq
DB search
MEDYLKGLNESQFEAVTTLQGPLMVLAGAGSGKTRVLTMRIAHLITNGVDPFNILSLTFT
NKAAKEMKERIAKVVGQSNARSLWMGTFHSVFARILRSEAHYLGYPSNFTIYDQQDALNV
IRKVLKDMNIDADLYKPKKVQSRISNYKNNLITVKAYYNNPELMEADEKANMKFIGKIYE
KYVEACFKNGSMDFDDLLLKTNELLTRFPEVLAKYQDRFRYILVDEYQDTNHSQYLIVKA
LASKFENICVVGDDAQSIYSFRGANIYNILNFKKDYPDAVTVSLEQNYRSTQNIVNAANV
VIAKNLQQFKKNVFSENEEGEKIKVYRSLSDADEANFVAGNIWELRNREQRKFSDFAILY
RTNSQTRAFEDSLRRKNIPYKVYGGLSFYQRKEVKDLIGYLRLLVNENDSEALMRIINYP
TRGIGETTQNKLIVFADSQNLPVSKVLDNLGIYAPQLKFNNGVLTKLSDFWSMIKAFQVL
LKTETAYSVAMEVAKRSGLIKFLKDDQTPEGISRVENVQELMNSMQGFIEEQMQIEDGDP
SLPNFLENIALSADTQRKDDEEDMVSLMTIHLSKGLEFPVVHLVGLEENLFPSFMSSATR
EDLEEERRLFYVALTRAEKQAFFSYAVSRFQWGKITDAEPSRFLSEVDEEYIEFLNPAIE
KRFINNSGITSNIFDEHPSEMKSFKKIEKKTISKTENDKPIAEPRKLKPVATARIINPSG
ASSQDIEVGDKVRHDRFGIGEVKFLDGTDPQNIKAKVVFLHEGEKNLILKYAKLTKI
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atggaggattatttgaaaggactgaatgaatcacaatttgaagccgttactactttacag
ggacctttgatggtacttgcaggagcaggttccggaaaaacacgtgtactcacaatgcgt
attgcgcatttgattaccaatggagtagatcctttcaatattttgtctttaacttttacc
aataaagctgcgaaagaaatgaaagaacgtattgcgaaagttgtaggacagagcaatgcg
agaagtctttggatggggacttttcactccgtttttgcaagaattttgagaagtgaagca
cattatttaggttatccttccaactttactatttacgatcagcaggatgctttgaatgtc
atcagaaaagttctgaaagacatgaatattgatgctgatttgtataaacctaaaaaagtt
cagtcaagaatttccaattataaaaataacctgattaccgtaaaagcatattataataat
cccgaattaatggaagctgacgaaaaagccaacatgaaattcatcggaaaaatttatgaa
aaatatgtagaagcttgtttcaaaaatggttcgatggattttgatgatttattgttgaaa
accaatgaacttttaacaaggtttcctgaagttttagcaaaatatcaggacagattcaga
tatattttggtagatgagtaccaagatacaaaccattctcagtatttaatcgtaaaagct
ttagcttcaaaatttgaaaatatttgtgtggtaggagacgatgcacagtctatttactct
ttccgtggtgcgaatatttataatattttaaatttcaaaaaagattatcctgatgcggtg
actgtttctttagaacaaaactaccgttcaacgcaaaatatcgttaatgcagcaaatgtt
gtcattgcaaaaaaccttcagcaatttaagaaaaatgttttcagtgagaatgaagaagga
gaaaaaattaaggtttaccgttcgctttccgatgctgatgaagccaatttcgtagccgga
aatatttgggagcttagaaacagagaacagagaaagttcagcgatttcgcgattttatac
cgtaccaattctcagacacgagcttttgaagactctttgagacgtaaaaatattccgtat
aaagtgtatggaggtttgtctttctaccaaagaaaagaggtaaaagatttgatcggttat
cttcgtcttttggtcaatgaaaatgattctgaagctttgatgagaatcatcaattatccg
acaagaggaattggtgaaaccactcaaaataaattaattgtttttgccgattcgcaaaat
cttccggtgtctaaagtgttagacaatttgggaatttatgctccgcaattgaaatttaat
aatggagttttaaccaaactaagtgatttttggtcgatgattaaagcgtttcaggttttg
cttaaaacagaaacagcttatagtgttgcgatggaggtagcaaaacgaagcggtttgatt
aaatttttaaaagacgaccaaactccggaagggatttcgcgtgtagaaaacgttcaggaa
ttaatgaactcaatgcagggtttcattgaagaacagatgcagattgaagatggtgatcct
agtttgccgaattttcttgaaaatattgcgctttccgccgatacgcaaagaaaagatgac
gaggaagatatggtttctttaatgacgattcacctttcaaaaggtcttgagtttccggtt
gtgcatttagttggattagaagaaaatctttttccaagttttatgagttcggcaactcgt
gaagacttggaagaagaaagacgtttgttttatgttgctttaacaagagctgaaaaacag
gcatttttctcttacgcagtttcccgttttcaatgggggaaaattactgatgctgaacct
tcacgatttttaagtgaagttgatgaagaatatattgaatttttaaacccggcgattgag
aagagattcatcaacaattctggaattacgtctaatatttttgatgagcatccttctgaa
atgaagagctttaaaaagatagaaaagaaaaccatttctaaaactgaaaatgataaaccg
attgctgaaccgagaaaattaaaacccgtagcaacagcaagaattatcaacccaagcgga
gcttcttcacaagatattgaggttggcgataaagtaagacacgaccgtttcggaatcgga
gaagtgaaattcttagatggaactgatccgcaaaatattaaagcgaaagtcgttttctta
cacgaaggcgagaagaatttgatcttgaaatatgctaaactgacgaagatttag
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