Chryseobacterium scophthalmum: ACLB9Y_03705
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Entry
ACLB9Y_03705 CDS
T11109
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
csco Chryseobacterium scophthalmum
Pathway
csco03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
csco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ACLB9Y_03705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csco03400
]
ACLB9Y_03705
Enzymes [BR:
csco01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
ACLB9Y_03705
DNA repair and recombination proteins [BR:
csco03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
ACLB9Y_03705
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Herpes_IE2_3
Motif
Other DBs
NCBI-ProteinID:
XMO02729
LinkDB
All DBs
Position
complement(827186..827950)
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AA seq
254 aa
AA seq
DB search
MRLITYNVNGIRAAFTKDFLGWLKTADPDIICIQESKAGNDQIDIESLEKAGYHSYWHSA
QRKGYSGVGIASKTKPNHVEYGCGIESYDNEGRIIRADFDGFSVISVYVPSASNIERLEF
KMQFCHDFLEYIKNLKKEIPNLIISGDFNICHQPIDIHNPVGLKNTSGFLPMEREWMTNF
IEECELIDSFRFFNNEPDNYTWWSYRQNARANNKGWRLDYNFASYSLKDKLSRAVILKEA
VHSDHCPALIEFNL
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgagattaattacctacaacgtcaacggcatcagagccgcttttaccaaagatttttta
ggatggctgaaaactgccgatccggatattatctgcattcaggaaagtaaagccgggaat
gatcagatcgacatcgaaagtcttgaaaaagcaggatatcacagttattggcattctgca
cagagaaaaggctacagcggagtcggaattgcatctaaaacaaaacccaatcatgtagaa
tatgggtgcggaattgaaagctatgataatgaaggaagaatcatccgtgcagattttgac
gggttttctgtaatttctgtctacgttccttctgcttccaatattgaaagactggaattt
aaaatgcagttttgccatgactttttagagtatatcaaaaatttaaagaaagaaattccg
aatttgattatttccggagattttaatatttgtcatcagccgattgacattcataatcct
gttggtttaaaaaacacttccggctttttgccaatggaaagagaatggatgaccaacttc
atcgaagaatgcgaattgattgatagtttcagattttttaataacgaaccagacaattat
acttggtggagttacagacaaaacgcaagagcgaataacaaaggttggagattagattac
aactttgcttcttattctttaaaagataaacttagcagagcggttatcttaaaagaagcg
gtacattctgatcattgccctgctttaatcgagtttaacctctaa
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