Chryseobacterium scophthalmum: ACLB9Y_06855
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Entry
ACLB9Y_06855 CDS
T11109
Name
(GenBank) sigma-54-dependent transcriptional regulator
Organism
csco Chryseobacterium scophthalmum
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
Response_reg
AAA_5
AAA
Mg_chelatase
AAA_3
SMC_N
AAA_19
AAA_2
AAA_16
AAA_30
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
XMO03348
LinkDB
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Position
complement(1537428..1538612)
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AA seq
394 aa
AA seq
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MQKILIVEDEKAISGVLHSILSDELTDYEFVIADDGLEGYKQIEKEDFALVISDIKMPKL
SGTELLKQSLALKPETTFIMISGHADIDSAVSCLKDGAYDFISKPIDINRLITSVKNALV
KETLKKENKNLQTENKTLKKKVNKKYQMIGESAALKKIQEMIEKVAVSDARVLITGPNGA
GKELVAHAIHNLSERSRGPMVEVNCAAIPSELIESELFGHVKGSFTGAIKDKQGKFEQAN
GGTIFLDEIGDMSLIAQAKVLRALQESKVSPVGSDKEIKVDVRVLAATNKNMQTEIEAGR
FREDLYHRLSVIEIYVPPLDDRKEDISLLVSHFSGMIADEHGTALKKFDESAIDALKALS
WTGNIRELRNVVERLIILGGATVSEEDVASFVRK
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaatccttattgtagaagacgaaaaagcaatttccggagtacttcacagtatc
ctttcggacgaactaactgactatgaatttgtcattgccgacgatggcttagaaggctat
aaacaaatagagaaagaagatttcgcattggtgatctcagacatcaaaatgccaaaactt
tccggaactgagcttttaaagcaaagtttagctctaaaacccgagactacttttattatg
atttccgggcatgccgacattgattctgcggtttcttgcttaaaggacggtgcatacgat
tttatttctaaaccaattgatatcaaccgattgattacaagtgtgaaaaacgctttggtg
aaagaaacattaaaaaaagagaataaaaatcttcagaccgaaaataaaaccctgaaaaag
aaagtcaacaagaaataccaaatgattggtgaatctgcggctttgaaaaaaattcaggaa
atgatcgagaaagtagctgtttctgatgcaagagttttgattaccggacccaacggagct
ggaaaagaattggtagctcatgctattcacaatttaagtgaaagatcaagaggaccaatg
gtggaagtaaactgtgcggcaataccttctgaattgattgaatctgaactttttggtcac
gtaaaaggatcatttactggagctatcaaagataagcaggggaaatttgagcaggcaaac
ggtggaaccattttcttagatgagattggagatatgagcttaattgcacaggcaaaagtt
ttgagagcattgcaggaaagcaaagtttctccggtaggaagcgacaaagaaatcaaagtt
gatgtaagagttttggctgcaaccaataaaaatatgcagacagagattgaagctggaaga
ttcagagaagatttgtatcacagactttctgtaattgaaatttatgtacctcctttggat
gacagaaaagaagatatcagtcttttggtaagccatttttcgggaatgattgctgatgag
cacggtactgctttgaaaaaatttgatgagtctgcaattgacgcattaaaagccctttcc
tggactggaaatatcagagaactgagaaatgttgtggaaagattaattattcttggagga
gctacggtttccgaagaggatgttgcaagttttgttagaaaataa
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