Chryseobacterium scophthalmum: ACLB9Y_09115
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Entry
ACLB9Y_09115 CDS
T11109
Symbol
secD
Name
(GenBank) protein translocase subunit SecD
KO
K12257
SecD/SecF fusion protein
Organism
csco Chryseobacterium scophthalmum
Pathway
csco02024
Quorum sensing
csco03060
Protein export
csco03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
csco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
ACLB9Y_09115 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
ACLB9Y_09115 (secD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ACLB9Y_09115 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
csco02044
]
ACLB9Y_09115 (secD)
Secretion system [BR:
csco02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
ACLB9Y_09115 (secD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
MMPL
Motif
Other DBs
NCBI-ProteinID:
XMO03784
LinkDB
All DBs
Position
complement(2006078..2008975)
Genome browser
AA seq
965 aa
AA seq
DB search
MQGKGLITIVAIVLGLICLNELLPTWYAGKIESQIEAANGNEKEIQRLKDETLNLGFTEL
SYAKAKDKEMKLGLDLKGGINVLLEINQRDLVNDLTNYSTNPILIEALNRTDEAQKNSTK
SYIDNFFVEFDAVNKAKGANLKLADPEIFGNTNLSEIKFNTTDEQVKSIVKKRIDLSVGT
AFEVIRTRIDKLGAIQPNVQRVPGTARISVEMPGMKDIDKVKKMLQTSAKLQFWEVQQFA
EVAPYFQTLSATVAAKGDSMGVAKNTNFLNLMQGGKSGSMSSVGSVKLTDTAKVNKILNS
KIAQSLRPANIKYTQFMWGYKPESTDEKSLVLYAVRGNINQKAPVDGAVETANIGYDELS
RVVVDMQMDSKGAKDWKTLTEKNVGKPVAVTLDNRVYTAPNVQGAIPNGRTQISGNFSQE
EAKELVDVLGAGKLPAGAKVVQATQVGPSLGQESIDAGVMSFSIAFLIIIAYIIFYYGLA
GVYAVIAMIINLFYIFGIMDSGDFTLTLPGIAGIVLSMAMAVDTNVIIYERTKEELFAGK
NILEAYKDGFKHALNAIIDGHLTMILTAVVLFFFGTGPIKGFALTLLIGAVMTLFTSILL
SRVMIFHRLNKGKSLSVWTPPTKNLFRNTWIDFIGKRKYSYILSAILTVISLGSIFVNGF
KFGIDFTGGRNYVVRFDKEVNAEDVENGLVKVFTTQDGKNSSVEAKTFGNNNQLKISTDY
LINDESLKADQTIEQKLFEGLKPSLPANMTLEEFKSADTDHAGIISSEKVGPSVADDIQT
HGTLAVVAALAGIFIYILVRFRKWQFSLGAVAALLHDAIIILGAFSLFHSVMPFNMEVNQ
DFIAAILTVLGYSINDTVIIFDRIREYLREKKALTLSGLFDDAISSTLGRTFNTTFTTLL
VILAIFIFGGDNLRGFMFALLIGIGFGAYSSIFIASAIAYDFLKTGKEEDVHGKSSSDKE
LLATK
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggaaaaggacttattacaattgttgctattgtactagggttaatttgcttaaat
gagctattaccaacctggtacgccggcaaaattgaatcgcaaatcgaagctgcgaacgga
aacgagaaagaaatccagagattaaaggatgaaactttaaatcttggatttacagaactt
tcttatgctaaggcaaaagacaaagaaatgaagctaggacttgacctgaaaggggggatc
aacgttcttttggaaatcaatcagagagatttggtgaatgatttaactaattattctacc
aatcctattcttattgaggctctaaacagaacagatgaagctcagaaaaactctactaaa
tcttatatcgacaatttctttgttgagtttgatgccgtaaacaaagcaaaaggcgcaaac
cttaaacttgcagatcctgaaatcttcggaaacactaatctttctgagattaaattcaac
accactgatgagcaggtaaaaagcatcgttaagaaaagaattgatctttctgtaggtaca
gcttttgaagtaatcagaaccagaattgataaattgggagctatccagccaaacgtacag
agagttccgggaacggcaagaatctctgtagaaatgccgggtatgaaagatatcgataag
gtgaagaaaatgcttcagacttctgcaaaacttcagttttgggaagtacagcaatttgct
gaggttgcaccttatttccagactttaagtgctacagttgcagcaaaaggtgactctatg
ggagttgctaaaaatactaatttcctaaacttaatgcaaggagggaaatctggaagcatg
agctctgtaggaagtgtgaaattgacagatactgcaaaagtaaacaagatcttaaacagt
aaaattgcgcagtctttacgtcctgcaaatattaaatatacccagtttatgtggggttac
aagcctgaatctacagatgaaaaaagcttggttctatatgctgtaagaggtaatatcaat
caaaaagctccggtagacggtgctgtagaaactgcaaacatcggttacgatgaattgagc
agagtagtggtagatatgcaaatggattctaaaggtgctaaagattggaaaacgcttact
gagaaaaacgtaggaaaaccagttgctgtaactttagataacagagtatatactgcgcca
aatgtacagggtgcaattcctaacggtagaactcaaatctctggtaacttctctcaggaa
gaagctaaagaattggtagacgttttaggagcgggtaaattacctgcaggtgcaaaagta
gtacaggctacacaagtaggtccatctttaggacaggaatctattgatgcgggagtgatg
tcattctctatcgcattcttaatcattattgcatatatcattttctactacggtttagca
ggggtttatgcagtaattgcgatgatcatcaacttattctacattttcggaattatggat
tccggagactttacattaacgcttcctggtattgcgggtattgtactttcaatggcgatg
gcggtagataccaacgtaattatttacgaaagaacgaaagaagaattatttgcaggtaaa
aatattcttgaagcttacaaagatggtttcaaacatgcattgaatgcaattattgatggt
cacttaacgatgattttgacggcagtagtattgttcttcttcggaacaggtcctatcaaa
ggatttgcattgacgttattgattggtgctgtaatgacattgtttacctcaatcttactt
tcaagagtaatgatcttccatagattaaataaaggtaaaagtctttcagtttggactcct
ccaacgaaaaacttattcagaaatacttggatcgattttattggaaaaagaaaatattca
tatattctttctgcaattttaacggttatctctttaggatcaatcttcgttaacggattt
aaatttggtatcgattttacgggtggtagaaactacgtggtaagatttgataaagaagta
aatgcagaagatgttgaaaatggtttagttaaagttttcacaactcaggatggtaaaaac
tcttctgtagaagctaaaactttcggaaacaacaatcagctgaaaatctctacagattac
cttatcaatgacgaatcattgaaggctgaccagactattgagcaaaaattatttgaaggt
ttaaaaccaagccttcctgcaaacatgactttagaagagtttaaatctgcagatacagat
cacgcaggaattatctcttctgaaaaagtaggaccttctgttgctgatgatattcagaca
cacggtactcttgcagttgttgctgcattggcaggtattttcatctatattttggtgaga
tttagaaaatggcagttttcattgggtgctgttgcggcactattacatgatgctattatt
atcttaggtgcgttctcgttattccactctgtaatgcctttcaacatggaggttaaccag
gattttatcgcggcaattcttacagtattgggttactcaatcaacgataccgtaattatc
ttcgatagaattagagaatacttgagagagaagaaagcgcttactttatcaggattgttt
gatgatgctatttctagtactttaggtagaacgttcaacacaacatttaccactttactt
gtaattcttgccatcttcatctttggtggagacaacttgagaggatttatgtttgcattg
ttaatcggtattggatttggagcttattcgtccatcttcattgcatcggcaattgcttac
gatttccttaaaacaggaaaagaagaagacgtacacggtaaatcttcatcagataaagaa
ttgcttgctacaaagtaa
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