Chryseobacterium scophthalmum: ACLB9Y_11325
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Entry
ACLB9Y_11325 CDS
T11109
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
csco Chryseobacterium scophthalmum
Brite
KEGG Orthology (KO) [BR:
csco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csco03032
]
ACLB9Y_11325
03400 DNA repair and recombination proteins [BR:
csco03400
]
ACLB9Y_11325
Enzymes [BR:
csco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ACLB9Y_11325
DNA replication proteins [BR:
csco03032
]
Prokaryotic type
DNA Topoisomerases
ACLB9Y_11325
DNA repair and recombination proteins [BR:
csco03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ACLB9Y_11325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
XMO00455
LinkDB
All DBs
Position
complement(2518907..2520010)
Genome browser
AA seq
367 aa
AA seq
DB search
MEQSDLEIISHLKPSKIVKIMKDPVASAKAVNLIYTSDAETSGIIRRKRGKKFQYFKEGE
KIKDKEEIKRINGLVIPPAWENVWICALDNGHLQATGFDVKNRKQYRYHSLWSALRNHTK
FYRMLQFGYALPEIRLQLEKDLALRNFEKRKILALIVSLMQRTNIRIGNNIYEKLYGSFG
LTTLKGKHVKVEGQKINFSFKGKKGVMHNVNLKSKRLARLIMKCKEIPGKELFQYVDDEG
KRHSVDSGMVNDYIKEISGEDFTAKDFRTWSGTVNALIAFKEIGYAENNSQYKKKVKAAL
DIVAEHLGNTSTVCRKYYVHPLVINLYENNSIKKYLDQLEIIEENDGKADLTQEEKLVLK
ILETEKM
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggaacaatcagacttagagattatttctcatcttaagccatcgaagattgtgaaaatt
atgaaagatccggtagcttctgcaaaggcagtgaatcttatttacacttccgatgcagaa
acttccggaattattcgcaggaaaagaggcaaaaagtttcagtattttaaagaaggcgaa
aagattaaagataaggaagagatcaagcgtattaatggtttggtaattcctccggcttgg
gaaaatgtttggatttgcgctttagataatgggcatcttcaggcaacaggttttgacgta
aaaaatagaaaacaatatcgttatcattccttgtggagcgctctgagaaatcacaccaaa
ttttacagaatgttgcagtttggttatgctttgccggaaattcgtctgcagcttgagaaa
gatttagctttaagaaattttgaaaagcgaaaaattctggctttgattgtcagtttaatg
caacgaaccaatattcgtattggtaataatatttatgaaaaactctacggttcttttggt
ttgaccactttaaagggaaaacatgtaaaagtagaaggacaaaaaattaatttctcattt
aaaggtaaaaaaggagtgatgcataatgtcaatctgaaaagcaagagattggcaaggcta
attatgaaatgcaaggaaattcctggaaaagaactttttcaatatgttgatgacgaagga
aaaagacattctgtagattctggaatggtgaatgattatattaaagaaattagtggcgaa
gattttacggcaaaagatttcagaacgtggtctggaacggtgaatgctttaattgctttt
aaagaaatcggctacgctgaaaataattctcaatataaaaagaaagtaaaagctgcatta
gatattgttgcggaacatcttggaaatacaagtacggtttgccgaaaatattacgttcat
cctttggtgattaatttgtacgagaataattccatcaaaaaatatcttgatcagcttgaa
attattgaagaaaatgatggcaaagcagatttaacacaggaagaaaaattggttttaaaa
attcttgaaaccgagaaaatgtga
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