Centruroides sculpturatus (bark scorpion): 111626836
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Entry
111626836 CDS
T06064
Name
(RefSeq) regulator of nonsense transcripts 1-like
KO
K14326
regulator of nonsense transcripts 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
cscu
Centruroides sculpturatus (bark scorpion)
Pathway
cscu03013
Nucleocytoplasmic transport
cscu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cscu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111626836
03015 mRNA surveillance pathway
111626836
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cscu03019
]
111626836
Enzymes [BR:
cscu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
111626836
5.6.2.5 RNA 5'-3' helicase
111626836
Messenger RNA biogenesis [BR:
cscu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
111626836
mRNA cycle factors
Common to processing body (P body) and stress granule
111626836
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
UPF1_1B_dom
UPF1_Zn_bind
AAA_30
AAA_19
ResIII
NPHP3_N
SLFN-g3_helicase
UvrD-helicase
AAA_16
DEAD
Helicase_RecD
nSTAND3
ATPase
SRP54
AAA
T2SSE
AAA_22
Motif
Other DBs
NCBI-GeneID:
111626836
NCBI-ProteinID:
XP_023226121
LinkDB
All DBs
Position
Unknown
AA seq
911 aa
AA seq
DB search
LLFYRDPEQWKPLIDDRSFLAWLVKVPQEQDQLRARQVTAQQINKLEELWKDNVDATFQD
LEKPGVDEEPQQVLLRYEDGYQYQNIFGPLVKMEADYDKKLKESQTQDNIEVRWDIGLNK
KIIAYFTIAKSDTEMRLMHGDELRLRYLGELQKPWSGVGHVIKIPDNYSEEVGIEMKTNL
GVPTECTSNFVVDFVWKSTSFDRMQAALRKFAVDESSVSPYIYHKLLGHEVEDVVLRYQL
PKHFSAPNLPELNRSQVYAVKHALQRPLSLIQGPPGTGKTVTSATIVYHLARQSNGPVLV
CAPSNIAVDQLTEKIHRTGLKVVRLCAKSREAISSPVSFLALHNQIRNMEGHSELNKLQQ
LKDETGELSSADEKRYRMLKKAHEKELLEAADVICCTCVGAGDPRLARFKFHSILIDESM
QATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLE
VQYRMHPQLSKFPSNFFYEGSLQNGVYADERMMKGVDFPWPQPDKPMFFYACQGQEEIAG
SGTSYLNRTEAALVEKITTRFLKCSVKPEQIGIITPYEGQRAYLVQYMQYNGSLHAKLYQ
EIEVASVDAFQGREKDLIIMSCVRSNEHQGIGFLNDPRRLNVALTRARYIIILFFYFEFF
QQPLWNHLLNFYKENKVLVEGPLNHLKESMIQFSKPRKLINTINPGGHFMHTTMYDAREA
MIPGSVYDRSSHLNGPVAYNRTHDQISYISPERAQAAMANIPVPFGIFMNMAHIPPRFYN
QHQQALQAHQNQRNRTGNRRGGTKQMPGRRTMQDRMNPNLSQSGYNSQASQDVMFSQGPL
TQGQLTMSQMSQPAFPGLSQPGLSQPELSQDTYLVDEFRSQTEGMLSQDSTYQGDRAFFH
ASQGGQFSQPY
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
ttacttttttatagggacccagaacaatggaaaccattaattgatgatagaagtttttta
gcgtggttggtaaaagtcccacaagaacaagatcagttgagagctcgtcaagttactgct
caacaaataaataaattggaagaattatggaaggataatgttgatgcaacttttcaagat
ttagaaaaaccaggagttgatgaagaacctcagcaagttctcctgagatatgaagatgga
taccagtatcaaaatatatttggaccacttgttaaaatggaagctgactatgataaaaag
ttaaaggaatcacaaacacaggataatattgaagtgcggtgggacattggtctgaataag
aaaattattgcttatttcactattgcaaaatctgatacagaaatgagacttatgcatgga
gatgaattaagattgcgctatcttggtgaattgcagaagccttggtcaggagtgggtcat
gtcatcaaaataccagataactacagcgaagaagttggtattgaaatgaaaacaaatctt
ggtgtccctactgaatgtacttcaaattttgttgttgattttgtttggaagtctacctca
tttgataggatgcaagctgcattacgtaaatttgctgtagatgaatcttctgtttctccc
tatatatatcataaattattaggacatgaagtagaagatgttgttttgagatatcaatta
ccaaaacatttttcagcacctaatcttcctgaattaaatagatcccaagtttatgcagta
aaacatgctttacaaagaccattatctcttattcagggcccacctggaactggaaaaaca
gtaacttctgctactatagtgtatcatttagctcgtcaaagtaatgggcctgttcttgtt
tgtgcacctagtaacattgcagttgatcaattaaccgaaaaaatccatcgtactggatta
aaggtggttcgactttgtgcaaaaagccgtgaagcaattagttcacctgtttcatttcta
gctcttcacaatcaaatcaggaatatggaaggtcattcggagttgaacaaactgcaacag
ttgaaagatgaaacaggtgaattatcatcagcagatgagaagcgttatagaatgcttaaa
aaagctcatgagaaggaattattagaggctgcagatgtcatttgttgtacttgtgttggt
gctggtgatccacgattagcacgattcaaatttcattctattttgattgatgaaagtatg
caagctactgaaccagagtgtatggtaccagtagtattaggtgcaaaacagttaattctt
gttggagatcattgtcaattaggaccagttgtgatgtgcaagaaagctgcacgagctggt
ttgtctcagtcattatttgaaagattagtagttcttggaatacgtccatttcgtttggaa
gtacagtatcgtatgcatccacaacttagcaaatttccttccaacttcttttatgaagga
tcattacaaaatggtgtttatgctgatgaaagaatgatgaaaggtgtagattttccatgg
cctcaacctgacaaaccaatgtttttctatgcttgtcaaggacaagaagaaatagcagga
tcaggtacatcttacctaaataggacagaagctgcattggttgaaaaaataacaacaaga
tttttgaagtgcagtgtaaaacctgagcagataggaattataacaccctatgaaggacaa
agagcttaccttgttcaatatatgcagtataatggatcacttcatgcaaaattatatcaa
gaaattgaagtagcaagcgttgatgcttttcaaggaagagagaaagatcttattataatg
tcttgtgtacgatctaatgaacatcaaggaattggttttctgaatgatcctaggcgttta
aatgttgctcttacaagagcaaggtatattataattttgttcttttattttgaatttttt
cagcaacctttatggaatcatttattaaacttctataaagaaaacaaagttcttgtagaa
ggtcccttgaatcatttaaaagaaagtatgatccaatttagtaaacctagaaaattgatt
aatacaataaatccgggtggtcattttatgcacacaacaatgtatgatgcaagagaagct
atgattcctggaagtgtatatgatcgttcatcacatttaaatggtccagtcgcatacaat
cgaactcacgatcagatctcgtatataagcccagagagagcacaagctgctatggctaat
attccagttccgtttggaatatttatgaatatggctcatattccaccaagattttataat
caacatcaacaggcattacaagcccatcaaaaccaacgtaatcgtactggaaatcgaagg
ggcggaacaaaacaaatgcctggtcgcagaacaatgcaagatcgtatgaatccaaatcta
tctcagtctggttacaatagtcaagcaagtcaggatgtcatgttttctcaaggaccatta
actcaaggacaactaactatgagtcagatgagtcagccagcttttcccggtctttctcaa
ccaggtttatcacagcctgaactctctcaggatacgtacttggttgacgaattccgttct
cagacggaaggtatgctttctcaagattcaacataccaaggagatcgggcatttttccat
gcctcacaaggtggtcagttttcccagccttattga
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