Centruroides sculpturatus (bark scorpion): 111628615
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Entry
111628615 CDS
T06064
Name
(RefSeq) spliceosome RNA helicase Ddx39b
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
cscu
Centruroides sculpturatus (bark scorpion)
Pathway
cscu03013
Nucleocytoplasmic transport
cscu03015
mRNA surveillance pathway
cscu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cscu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111628615
09122 Translation
03013 Nucleocytoplasmic transport
111628615
03015 mRNA surveillance pathway
111628615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cscu03019
]
111628615
03041 Spliceosome [BR:
cscu03041
]
111628615
Enzymes [BR:
cscu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111628615
Messenger RNA biogenesis [BR:
cscu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
111628615
Spliceosome [BR:
cscu03041
]
Complex C
Other components
EJC/TREX
111628615
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
111628615
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-GeneID:
111628615
NCBI-ProteinID:
XP_023228211
LinkDB
All DBs
Position
Unknown
AA seq
423 aa
AA seq
DB search
MAENEQDLLDYEEEEEQEQTTTETATETKKPACGYVAIHSSGFRDFLLKPELLRAIVDCG
FEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQLDTVEGQVSVLVMCHTRE
LAFQISKEYERFSKYMPGIKVGVFFGGMNIANDEKILKVNCPHIVVGTPGRILALVRSKK
LNLRHIKHFILDECDKMLEQLDMRRDVQEIFRNTPHEKQVMMFSATLSKEIRPVCKKFMQ
DPMEVYVDDEAKLTLHGLQQYYVKLKDNEKNRKLFELLDVLEFNQVVIFVRTVQRCMALA
QLLVEQNFPAIAIHRAMTQEERLSRYQQFKDFHKRILVATNLFGRGMDIERVNIVFNYDM
PEDSDTYLHRVARAGRFGTKGLAITFVSDESDAKILNEVQDRFDVNISELPDEIDISSYI
EGR
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaatgaacaagaccttcttgattatgaagaggaggaggaacaagaacagaca
actactgaaactgcaacagaaacaaaaaagcccgcttgtggatatgttgcaattcacagt
tcaggattcagagattttcttcttaaacctgaattgctaagagctattgttgattgtggt
tttgaacatccatcggaagtgcaacatgaatgtattcctcaagccattttgggaatggat
atcctttgtcaagcaaaatcaggaatgggtaaaacagctgtttttgttttggctacactt
caacaattggatactgtagaaggacaagtttctgttctggtgatgtgccatacaagagaa
ttggcttttcagatttctaaagaatatgaacgattttcaaaatatatgccaggcattaaa
gttggagtattttttggaggaatgaatatagcaaatgatgaaaagatcctgaaagttaac
tgccctcatattgttgtaggaacacctggtcgtatcctagcattggtacgaagcaaaaaa
ttaaatctgcgtcatatcaagcattttattttagatgaatgtgacaaaatgcttgaacag
ttagatatgagacgtgatgtacaagaaatattcagaaatacaccacatgaaaagcaagtg
atgatgttcagtgctacactcagcaaggagattcgtccagtctgcaagaagtttatgcaa
gacccaatggaagtatatgtagatgatgaagcaaaattaactttgcatggtttacaacaa
tattatgtgaaattgaaggacaacgaaaaaaatcgcaaattgttcgagcttttggatgtt
ttggagttcaaccaggtggtgatatttgttcgtactgttcaaagatgtatggcccttgct
cagttgcttgtagaacagaattttcctgcaatagcaattcatagagctatgactcaagaa
gagagattatctcgctatcaacaatttaaagactttcataaacgaattctagttgctaca
aacctgtttggaagaggaatggatattgaaagagtgaatattgtctttaattatgatatg
ccagaagattcagatacctatcttcatagggttgcccgtgctggtcgatttggcacaaaa
ggtttggcaattacttttgtatcagacgagagtgatgcaaaaattctcaatgaagtacaa
gatcgttttgatgtcaatatatctgaactccctgacgaaattgatatttcatcatacatt
gaaggacgttaa
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