Centruroides sculpturatus (bark scorpion): 111639648
Help
Entry
111639648 CDS
T06064
Name
(RefSeq) helicase SKI2W-like
KO
K12599
antiviral helicase SKI2 [EC:
5.6.2.6
]
Organism
cscu
Centruroides sculpturatus (bark scorpion)
Pathway
cscu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cscu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111639648
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cscu03019
]
111639648
Enzymes [BR:
cscu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
111639648
Messenger RNA biogenesis [BR:
cscu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
111639648
mRNA degradation factors
3'-5' decay
Ski complex
111639648
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
Ski2_N
DEAD
MTR4_beta-barrel
DEXQc_Suv3
Helicase_C
DUF7329
MTR4-like_stalk
DUF3516
Mce4_CUP1
Motif
Other DBs
NCBI-GeneID:
111639648
NCBI-ProteinID:
XP_023241330
LinkDB
All DBs
Position
Unknown
AA seq
1238 aa
AA seq
DB search
MIPMDIKLENLELVHLGRESKFDLIPEDDSYINKSTLVFDLPPVIPDLSEQLEEILDHPE
KLSIYDLDNVQRHIPRKPNISSLFTTELCPLQTTLKAERNMTTGEVIKFNEVIIEDNASN
SKNSMSFKRAPDVTTDVKGNPNNLPFWPGGFDDYSFEKLKDNIKNQDIDFVNDLLTIPPG
FEVGMKFEKKKEEIEQSVIKLSDILSSYDISELDSVAEGFVFESSEDIDRISDATATTST
TITSENDELEETLSKTPDVLNISETKEIETESTTDWAVEVNVLLPVEDFHQRIPNMAFKY
DFELDTFQKQAILHLENNDNVFVAAHTSAGKTVVAEYAIALAMKSMTKAIYTSPIKALSN
QKFKDFKKTFEDVGLLTGDIQLNKTASCLIMTTEILRSMLYNGSEVVRNLEWVIFDEVHY
INDSERGVVWEEVLIMLPSHVKLVLLSATVPNTLEFADWIGRIKQKKIYVITTLKRPVPL
EHHLYTGSGGKSKGELFMIVDAAGNFKTLGYNAALNAKQERTSKHQHSFGPKGYRNNVSE
KQDKNTYIGLIEYLRQHDKLPVVCFTLSRKKCDDNAQMLSSVDLTVKEEKGEIHKFVTSC
ISKLNKSDRKLPQVVTMQQLLKRGLGVHHSGILPILKEVVEMLFERGLIKMLFATETFAM
GINMPARTVVFDSIKKHDGQNFRELLPSEYIQMAGRAGRRGKDSEGTVIIMCKADIPETS
VLYKMMLGKPTKLESKFRLTYSMILNLLKVHNENLRVEDMMKRSFREAFSQRNVKEDEKV
LKELIETFTHLEKLECEICQFDIKQYCKMVQDFYNSKTNLLKKIFNSQFGLKLFSQGRLL
TVKTSYHSNTFGVILNSDKKVLKVLLMCKYSSERCKSTTDILDMDEASIKQLPWLPKLYV
PESVSSYHITSISVNEIQKIFNKVIKIDANEIFNDWNKQIKNDNEIPGKSINKLVQKLHQ
MIMENENGLPPVDIIKECGVRDIELFERVKDILHTSEVLEKFTCLTCVDFIDHFVKTFKE
IELEKKMNNYKLKLSEKSLQLLPEYQARIRVLQELHYIDNTNTTEMKGKVACAMSNHEIF
LTELLVDDVFKSLKPEEIAALLSCTVFQQRMDDVPDEVLPFSLQEGKEKLLAIIQHIGET
QVKCGLKQSEKEFSDQYNFNLCNVVYEWAKGTTFSEIMNITTVQEGIIVRCIQRLDEILK
DVRAAARTIGNPELEAKTEKASQMIKRDIVFAASLYIQ
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atgataccaatggatattaaattagaaaatcttgaacttgttcacttaggaagagagtca
aaatttgatttaattcctgaagatgacagttatattaataaatctacattggtttttgat
cttccccctgtaatacctgatttatctgaacaattagaagaaattttagatcatccagaa
aagctttctatttatgatttagataatgttcagagacatatacctcgaaaaccaaatata
tcttcattatttacaacggagttatgtcctttacaaacaactttaaaagctgagaggaac
atgaccactggtgaagtaataaagtttaacgaagttattattgaagataatgcatcaaat
tcaaaaaattcaatgtcatttaaacgagctccagatgtgaccacagatgtgaaaggaaat
cccaataatcttccattttggccaggtggttttgatgattattcttttgaaaaattgaag
gataacattaagaatcaagatattgactttgtcaatgatctattaacaataccacctgga
tttgaagttggaatgaaatttgagaaaaagaaagaagaaattgaacaatctgtaattaaa
ttgtcagatattttgtcttcatatgatatatctgaattagattcagtagcagaaggattt
gtgtttgagagtagtgaagatattgatagaatttcagatgctactgctactacttctact
actataacatcagaaaatgatgaattagaagaaactctttctaagacacccgacgtttta
aatatcagtgaaactaaagaaattgaaacagaatcaacgactgattgggctgttgaagta
aatgtacttcttcctgttgaagattttcatcaaagaatcccaaatatggcatttaaatat
gattttgaattggatacatttcaaaaacaagccattttgcatcttgagaataatgataat
gtgtttgttgctgctcatacatctgctggaaagactgttgttgcagaatatgccatagct
cttgcaatgaagagtatgacaaaagcaatttacacttcacctattaaagcactttccaat
caaaaatttaaagatttcaagaaaacatttgaagacgttggcctgttaacaggtgatatt
cagctaaataaaactgcttcttgcttaataatgactactgaaattttaagatcaatgctt
tataatggttcggaagttgtaagaaacttggaatgggtaatttttgatgaagtgcattac
attaatgattcagagcgtggagttgtatgggaagaagtcttgattatgttaccatcacat
gttaaattagtgcttctgagtgccactgtgcctaatacattagaatttgctgattggatt
gggaggataaaacaaaagaaaatttatgtaattacaacattgaaaagaccagttccttta
gaacatcatttatatacaggtagtggaggaaaatcaaaaggtgaattatttatgattgta
gatgctgcaggaaattttaagacacttggttacaatgctgctttaaatgccaaacaagaa
agaacaagtaaacatcaacattcatttggacctaaaggttatcgaaacaatgtttctgaa
aaacaagataaaaacacttacataggattaattgaatatcttcgtcaacatgataaatta
ccagttgtttgttttacgttgtccagaaaaaaatgtgatgataatgcccagatgctttca
agtgttgatctaacagtaaaagaagaaaagggtgaaatacataaatttgtgacttcatgt
atttctaaattgaacaaatctgatcgaaaattaccccaggttgttactatgcaacaattg
ctaaaaagaggacttggagttcatcacagtggaattttacctattttaaaagaagttgta
gaaatgttatttgaaagaggactcataaaaatgctgtttgctacagaaacatttgcaatg
ggaatcaacatgcctgctcgaacagtagtttttgacagtattaagaaacacgatggacag
aattttcgagaattgcttccttcagaatatatacaaatggctggacgagcaggaagaaga
ggaaaagatagtgaaggaacagtaattattatgtgcaaagcagatattcctgaaacatca
gttttatataaaatgatgttgggtaaacctacaaaattagaatcaaaattcagattgact
tacagcatgattttaaatcttcttaaagttcataatgaaaatttaagggtggaagatatg
atgaaacggtcatttagagaggcattttcacaacgtaatgtgaaggaggacgagaaagtt
cttaaagaattaattgaaacttttacacatttggaaaaattggaatgtgaaatttgtcag
tttgacataaaacaatattgtaaaatggtccaggatttctataattcaaaaacaaactta
ttgaaaaagatttttaatagtcaatttggtttgaaattgttttctcaaggaagattatta
actgttaaaacttcatatcattccaacacttttggtgttattctgaattcagataaaaaa
gttcttaaagttttattgatgtgtaaatattcatcagaacgatgcaagtcaactactgat
attctggatatggacgaagcatcaattaaacaattaccctggttgccaaagttatacgtt
cctgaaagtgtatcaagttatcatataacaagtatatcggtgaatgaaatacaaaaaata
ttcaataaagtaattaaaatagatgcaaatgagatattcaatgattggaataaacaaata
aaaaatgataatgaaattcctggaaaatctattaataaacttgttcaaaaattacatcaa
atgattatggaaaatgaaaatggtttgcctccagtagacatcattaaagaatgtggtgtt
agagatattgaattgtttgaaagagtgaaagatattctacatacatcagaagttttggaa
aaatttacttgtttaacttgtgtggatttcattgatcattttgttaagacattcaaagag
attgaattagaaaagaaaatgaataactataaactgaagttgtctgagaaaagcctacag
ttattgcctgaataccaggcacgaatcagggtacttcaagaactacattatattgacaac
acaaataccactgaaatgaaaggaaaggttgcttgtgcaatgagtaatcatgaaattttt
ctaactgaattattagttgatgatgtctttaaatcactgaaacctgaagaaattgctgct
ttgttatcttgtacggtatttcagcagagaatggatgatgttcctgatgaagttttgcct
ttctccttacaagagggaaaggaaaaattattggccataatacaacatattggtgaaact
caggtgaagtgtggtttgaaacaatcagagaaggaattttcagaccagtacaattttaat
ttatgtaatgtagtatatgaatgggctaaaggcacaacgtttagcgaaattatgaacatt
accaccgtacaagaaggaatcattgttcgttgcattcaacgattagatgaaattttaaag
gatgtccgagccgcagcaagaacaataggcaatccagaactggaagctaaaacagaaaaa
gcatctcaaatgattaaaagagacattgtatttgctgctagcctgtacatccaataa
DBGET
integrated database retrieval system
