Thermoclostridium stercorarium subsp. stercorarium DSM 8532: Clst_0050
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Entry
Clst_0050 CDS
T02527
Name
(GenBank) ABC transporter periplasmic subunit
KO
K15580
oligopeptide transport system substrate-binding protein
Organism
csd
Thermoclostridium stercorarium subsp. stercorarium DSM 8532
Pathway
csd01501
beta-Lactam resistance
csd02010
ABC transporters
csd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
csd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Clst_0050
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Clst_0050
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Clst_0050
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csd02000
]
Clst_0050
Transporters [BR:
csd02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
Clst_0050
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
NUMOD4
SBP_bac_3
Motif
Other DBs
NCBI-ProteinID:
AGI38168
UniProt:
L7VGI2
LinkDB
All DBs
Position
55668..57368
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AA seq
566 aa
AA seq
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MIRKLSALFLVLAVICGVLAGCTTTGNKKDSGGVKTETGAIEGEKDASSTESRLADEQIL
TFVGHNDMITLDVSLMNDEMSALVMYAVNEALIRYSKGKIIPGIAERYEVSDDGTVYTFH
LHDAKWSDGEPVTAYDFEYAYLRLLSPDTGSSQIESFSSVLNAMAYANGEITDPSEVGIK
AADEKTLVITLAKPDPFFLEEMAQGINFYPIRKDYVEKYGKNYGSSPETFIGCGPFVLTE
WSQGSKIVMEKNPLYWDADNIVLEKVVEYIVGDENTRVGMYDLGEVDGIYSISAVQTVKY
SGEYGTRAGGTLQHLVFMSKEGAVLSNKNLRLALSYAIDRESIVKAISPPGTVVADSMID
PEISLNGESIIEKYPASSHVPPNGDPEKAKEYLNAALSEMGLSSPSELPEINYVCLDSPT
HRAYAEALQAQWKDVLGVNVNINIMPVPQAIGSLLAGEFDIFLNGMSTGVSPDTLLDNYT
KDNPNNYAKWSNDKYTELMNASTNADSLEERFTKLQQAHQLILDECPVAPLWLPGTAYLF
RDYVDGLYYGRETGSIEFIYARILAH
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgataagaaagctgtccgcattatttttggtacttgccgttatttgtggtgtccttgcc
ggttgtaccaccacggggaataaaaaagattccgggggtgtaaaaaccgaaaccggtgct
atcgaaggagaaaaggacgcttcttcaaccgaatcacggctggcggatgagcagattctt
acttttgtcggacataatgatatgattacccttgacgtaagtctgatgaacgacgagatg
tctgcgctggttatgtacgctgtaaatgaagcgcttatacgttacagcaaagggaaaata
atcccgggtattgccgagaggtatgaagtttcggatgacggcactgtttacacattccat
ttgcacgatgcgaaatggtccgacggtgagcctgtaacggcttatgatttcgagtatgcg
tatctgcgtcttctgagtcctgacaccggctcttcccagattgaatccttcagttcggtg
ttgaatgcaatggcatatgccaacggtgagataaccgatccgtctgaggttggtattaag
gccgcagatgaaaaaacgctggttattacccttgccaaacccgatccatttttccttgag
gaaatggcacaggggataaatttctatcccatccggaaggattatgtggaaaagtacggg
aaaaattacggttcaagtcctgaaacctttatcggatgcgggccttttgttcttacggaa
tggtctcaggggtcgaaaatcgttatggagaagaaccccctgtactgggatgcagacaat
atagttcttgaaaaagtggttgagtatattgtcggtgatgaaaacacccgtgtcggcatg
tatgacctgggtgaagtcgacggtatctacagtatttccgccgttcagacggtaaaatac
agcggcgagtacggaacccgcgcaggaggcacgctgcagcatctggtgttcatgtctaag
gaaggggctgtgctgtcgaacaaaaaccttcgtctggcattaagctatgcaatagatcgt
gaatccatcgtaaaagcgatatcaccgccgggaaccgttgtcgcagacagcatgattgat
cccgaaatatctttgaacggtgaatcaataattgaaaagtatcctgcttccagtcatgtt
ccgccgaacggagatcccgaaaaggcaaaggaatatctgaatgctgctttgtcagaaatg
ggcctttcttcaccttcggagcttccggaaataaattacgtatgtctggattccccgacc
cacagagcatatgccgaggcccttcaggcacagtggaaagatgtgctgggagtgaatgta
aacatcaatatcatgcccgtgccgcaggccattggaagccttctggccggcgagtttgac
atattccttaacggtatgagcaccggagtgtctcccgatacgcttctggacaattataca
aaagacaatccgaacaactacgccaaatggtccaatgacaaatataccgagctgatgaat
gcttcaacaaatgcagatagccttgaagaacgttttaccaagctgcagcaggctcaccag
ctgattttggacgaatgccccgttgcgccgctgtggctaccgggcacggcatacctgttt
agagattatgtagacggactctattacgggcgtgagacgggttcaatagaatttatatat
gcaaggattttggctcattaa
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