Thermoclostridium stercorarium subsp. stercorarium DSM 8532: Clst_0278
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Entry
Clst_0278 CDS
T02527
Name
(GenBank) pseudouridylate synthase-1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
csd
Thermoclostridium stercorarium subsp. stercorarium DSM 8532
Brite
KEGG Orthology (KO) [BR:
csd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csd03016
]
Clst_0278
Enzymes [BR:
csd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Clst_0278
Transfer RNA biogenesis [BR:
csd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Clst_0278
Prokaryotic type
Clst_0278
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
PCRF
Motif
Other DBs
NCBI-ProteinID:
AGI38381
UniProt:
L7VKX6
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All DBs
Position
319466..320266
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AA seq
266 aa
AA seq
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MGFKRIKLVIEYDGSFFHGWQVQNNQLSVQGEIEKAIFKITGEKVSVTGSGRTDAGVHAF
GQVAHFDTQSRIPAEKFAVVLNTVLPPSIAVISSKEVSPDFHARFSAIKKTYKYKVLNRP
MRSPIMDKRAWHVPWPLDIESMNRAAAYFIGRHDFTAFCASGHNVKNFVREIYVSEWTEE
EGCFVYTVTGNGFLYNMVRIMTGTMVEVGLNKRSAENIPELLEKKNRRLAGITAPPYGLY
LWEVFYDEENPNGRPGREECFGGDDE
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
gtgggctttaaaaggataaagcttgttatagaatatgacggctccttcttccatgggtgg
caggtccagaacaaccagctttcggtccagggagagattgaaaaagcaatttttaaaata
accggggaaaaagtaagcgtaacgggttcgggccgcacagacgccggtgttcatgccttc
ggccaggtagcccatttcgacacccaatcgcgaatacctgctgagaaattcgccgtggtg
cttaataccgtacttcctcccagtattgcggtgatttcttcaaaggaagtttccccagat
ttccatgccaggttctccgcaataaaaaagacatataaatacaaagtcctgaaccggccg
atgcgttctccaattatggacaaacgtgcatggcatgtgccatggcctctcgatattgaa
agcatgaacagggcagcggcttattttatcggccggcacgattttaccgcattctgtgca
agcggacataacgtgaagaatttcgtgcgggagatctatgtttcggaatggacagaggaa
gaaggatgctttgtttacaccgtaacaggaaacggttttctttacaacatggttcggata
atgacagggacaatggttgaagtgggtttaaataaaaggtctgctgaaaacatacctgag
cttttggaaaaaaagaacaggcggctggccggaattaccgcacccccttacgggctttac
ctgtgggaggtattctatgatgaggaaaatcccaacgggaggcccggtcgggaggagtgc
ttcgggggtgatgatgaatga
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