Thermoclostridium stercorarium subsp. stercorarium DSM 8532: Clst_0280
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Entry
Clst_0280 CDS
T02527
Name
(GenBank) DNA-directed RNA polymerase beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
csd
Thermoclostridium stercorarium subsp. stercorarium DSM 8532
Pathway
csd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
csd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Clst_0280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csd03021
]
Clst_0280
03400 DNA repair and recombination proteins [BR:
csd03400
]
Clst_0280
Enzymes [BR:
csd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Clst_0280
Transcription machinery [BR:
csd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Clst_0280
DNA repair and recombination proteins [BR:
csd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Clst_0280
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
AGI38383
UniProt:
L7VLF3
LinkDB
All DBs
Position
321342..325124
Genome browser
AA seq
1260 aa
AA seq
DB search
MVHPVKLGRTTRMSYSKIEEVLEMPNLIEVQKNSYQWFLDEGLREVLRDVSPITDYTGNL
IMEFIDYSLDLDNIKYSIEECKERDATYSAPLKVKVRLINKETGEVKEQDIFMGDFPLMT
ETGTFVINGAERVIVSQLVRSPGVYYSMDRDKLGKKLYSTTVIPNRGAWLEYETDSNNVV
YVRIDRTRKLPITVLLRALGYGTDAQLMQLFGEEEKLLATIQKDNTKSEEEGLLEVYKRL
RPGEPPTVESASALLTGLFFDPKRYDLSKVGRYKFNKKLALAARIRNHIAAEDIVDGQTG
EILVEKGQVITSEVAWQIQNSGVNVVNLDINGKTVKVIGNNTVDIQPYINFDAASVGINE
KVRYDVLKEILNEYDNDEDIKRAVIENKDLLIPKTITIEDIVATVNYIFGLDYGIGSLDD
IDHLGNRRLRSVGELLQNQFRIGLARMERVIRERMTIQDLDAVTPQALINIRPVAAAIKE
FFGSSQLSQFMDQTNPLSELTHKRRLSALGPGGLSRERAGFEVRDVHHSHYGRMCPIETP
EGPNIGLISSLSTYARVNEYGFIEAPYRKVDKATGRVTNEVYYMTADEEDGYVIAEANEP
LDEEGRFINKKIGCRYQDQIIEVSPDQVDFMDVSPKQLVSVATSMIPFLENDDANRALMG
SNMQRQAVPLIRTEAPIVATGIEYKAAIDSGVCVLAKADGVVESVSATEIVIRREDGKKD
VYKLLKYKRSNQGTCINQRPIVRRGDIVKKGDVIADGPSTDQGELALGRNVLIGFMTWEG
YNYEDAVLISEELVRDDVYTSIHIEEYEAEARDTKLGPEEITRDIPNVGEDSLKDLDERG
IIRIGAEVRAGDILVGKVTPKGETELTAEERLLRAIFGEKAREVRDTSLRVPHGESGIVV
DVKVFSRDMGDELPPGVNQLVRVYVAQKRKISVGDKMAGRHGNKGVISRILPVEDMPFLP
DGTPLQVVLNPLGVPSRMNIGQVLEVHLGYAAKALGWKVATPVFDGATENDVIETLKLAG
LPEDGKTVLYDGRTGEPFDSRVTVGYMYYLKLAHLVDDKIHARSTGPYSLVTQQPLGGKA
QFGGQRFGEMEVWALEAYGAAYSLQELLTVKSDDVVGRVKTYEAIVKGENVPEPGIPESF
KVLIKELQSLCLDVKVFSEEHNEIEIKESVDDDYDELEVNLEGREGEEIPRIEEDYGTDS
GSETDADIDSDTDADDFIDDDFSVDTDLDSLEDAEELDEDAVDRLFGIDDDDDLLDDDDI
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atggtacatcctgtgaaactgggtcgaacaacccgcatgagctattctaagattgaagaa
gttcttgaaatgccaaatctgattgaagttcagaaaaattcctatcagtggttcctggat
gaaggtttgagagaagtcttaagagatgtttccccgataaccgactataccggcaacctg
attatggaattcattgactattcgttagatctcgataacataaaatattcgattgaagaa
tgcaaggaaagggatgccacctactccgctccgctgaaggttaaagtacgccttatcaac
aaggagaccggagaggttaaggaacaggatatattcatgggagatttcccgctaatgacc
gaaaccgggacttttgtgataaacggagccgaacgtgttatagtaagccagctggtccgt
tcgcccggtgtttactattctatggatcgcgacaagttgggtaaaaaactttattccact
accgttatacccaacaggggagcatggcttgaatacgagaccgattccaataacgtggta
tatgtcagaatcgacagaacaaggaaactaccgataaccgttttgctgagagcactgggg
tatggaaccgatgcccagcttatgcagcttttcggcgaagaagaaaaacttttggccaca
attcagaaagataatacgaaaagcgaagaagaaggccttctggaagtatacaagcgcctg
cgccctggcgaaccaccgacggttgaaagtgcaagcgctctgctgacaggtctgttcttt
gacccgaagaggtatgatctgtccaaagtgggtcgttataaattcaataagaaactcgca
ctggctgcgagaattcgcaatcacatagcagcggaagacatagttgacgggcagaccggc
gaaatacttgttgaaaagggccaggttattaccagcgaagtggcatggcaaattcagaat
tcgggagtaaatgtcgttaacctggatattaacggaaagacggtaaaggttataggcaat
aacaccgtagacattcagccgtatattaatttcgacgccgcatcggtagggattaacgaa
aaggtaagatacgacgttcttaaggaaatccttaatgaatacgacaatgatgaggatatc
aagcgggcagttattgaaaacaaggaccttctcataccgaagaccattaccatagaagac
attgttgccacggtaaactatatattcggtctggattacggaattggttcccttgacgat
atagaccatttggggaacagaagattgcgttcggtcggtgaactgcttcagaaccagttc
cgtataggtctggcaagaatggaacgggtaatccgtgaaagaatgacaatccaggatctt
gacgctgtgacacctcaggcgctgatcaatatacgtcctgttgcagctgcaatcaaggag
ttcttcggaagttcgcagctttcacagttcatggatcagactaacccgctgtcagagctt
actcataaacgccgtctgagtgctcttggccccggtggattgtcccgtgaacgggcaggt
tttgaagtccgcgacgttcaccattcccactatggaaggatgtgcccgatagaaacccct
gaaggcccgaatataggtcttatcagctcgttgagcacatatgcaagggttaacgaatat
ggtttcattgaagcgccgtacagaaaagtggacaaagcaaccggacgggttacgaatgaa
gtgtattacatgacggcggacgaggaagacggatatgtaattgccgaggccaacgagccg
ctggatgaggaagggcgctttattaataaaaaaataggatgccgttaccaggatcagatc
atagaggttagtcccgatcaggttgacttcatggatgtttcgcctaaacagcttgtttcg
gttgctacatcgatgattccgttcctcgaaaacgacgacgcaaaccgcgccctgatggga
tccaacatgcagcgccaggctgttcctcttatccgtaccgaagcgcctattgttgccacg
ggtattgagtataaagcagccatagattccggcgtttgtgttctggcaaaggccgacggt
gttgtggaaagcgtgtccgcgaccgagattgtgatccgccgtgaggacggcaaaaaggat
gtatataaattattgaaatataagagatctaaccagggaacatgtattaatcaacgtccc
attgtcagaagaggggatattgtcaagaaaggcgacgtgatagccgacggaccgtccacc
gatcagggcgaactggcgctgggaagaaacgttctgattggtttcatgacgtgggaagga
tataactacgaggacgccgttcttataagcgaagaactggtcagggacgatgtttatacg
tcaattcacatagaagaatatgaagcagaggcccgtgatacaaagctgggacctgaggag
atcaccagagatattccgaacgtgggcgaggattcgctgaaagatctcgatgaacgcgga
atcatacgtatcggtgctgaagtgcgcgccggcgacatactggtcggaaaggtaacgcct
aagggagaaaccgagcttaccgccgaagaaagacttttacgtgcgatattcggtgaaaag
gcaagagaagtgcgtgatacatcgttaagggttccgcacggtgaatcgggtattgttgtt
gacgtaaaggtattctcccgtgacatgggcgacgagcttccgcccggagtaaaccagctt
gtgcgtgtttatgttgcccagaagagaaagatatctgtcggtgacaaaatggcagggcga
cacggtaacaagggtgttatttccaggattctgcctgtggaagatatgccgttccttccc
gacggaactccgctgcaggttgtgttgaatccccttggcgttccgtcgcgtatgaatatc
ggtcaggtactggaagttcacctgggatatgcggcaaaagcccttggatggaaggttgcc
acaccggtatttgacggtgccaccgaaaatgacgttattgaaaccctgaaacttgccgga
ctgcctgaggacgggaaaactgttctgtacgacgggcgtaccggagagccctttgacagc
agggtaaccgtgggttatatgtattacctgaaacttgcccacctggtagatgacaagatc
catgcccgttcaacaggtccttactcccttgttacacagcagcctttgggcggaaaggca
cagttcggcggacagcgtttcggtgaaatggaagtttgggcattggaagcatacggtgcg
gcgtacagcctgcaggaactgctgaccgtcaagtccgacgacgtggttgggcgtgtaaag
acctatgaggctattgtcaagggtgagaacgtaccggagccgggtatacccgaatccttt
aaagttttgatcaaggagcttcagagcctctgcctggacgttaaggtattctccgaagaa
cataatgaaattgagattaaggaatcggtggacgacgattatgatgaactggaagtaaat
cttgaaggacgcgaaggtgaggaaatcccaaggattgaagaggattacggcaccgattcc
ggctccgaaaccgatgccgatattgattccgataccgacgctgatgatttcatcgacgat
gacttcagtgtggacaccgaccttgacagtctagaggatgctgaagaactggacgaggac
gctgttgacaggttgttcggaatagacgatgacgatgatctgcttgacgatgatgacata
tag
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integrated database retrieval system
