Thermoclostridium stercorarium subsp. stercorarium DSM 8532: Clst_0499
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Entry
Clst_0499 CDS
T02527
Name
(GenBank) endonuclease-4
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
csd
Thermoclostridium stercorarium subsp. stercorarium DSM 8532
Pathway
csd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
csd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Clst_0499
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csd03400
]
Clst_0499
Enzymes [BR:
csd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
Clst_0499
DNA repair and recombination proteins [BR:
csd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Clst_0499
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
UvdE
PRMT5_TIM
Motif
Other DBs
NCBI-ProteinID:
AGI38596
UniProt:
L7VLF6
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All DBs
Position
562810..563679
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AA seq
289 aa
AA seq
DB search
MDRIWFGPSGNSSKFYEDGYKHSYQMPEWLRNMGLNAYEYQCNKGTNIKKETAEKIGEEA
RKAGIRLSIHAPYYINLSSSEEEKRENSIQYILNTCRVAKWMGADRIVIHPGSVGRFSRE
EAMMKALPVLAEAVKRADEAGFSDITLCPEVLGKMNNLGSLEEVLIMCRLDDRLIPCIDF
GHLHARTLGSLTGIDDFNAVFDKIENSIGAERAKKIHIHFSRIEFTQAGEKKHHTMDDTE
YGPDFELLARVLVERKTEPVIICESRDRMAEDAVILKGIYERVKNGCSV
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
ttggacaggatttggttcggaccttccggaaattccagcaagttttatgaagacggatac
aaacattcgtaccagatgccggaatggctcaggaacatgggcctcaatgcatatgagtac
caatgcaacaaaggcacgaacataaaaaaggagacggccgaaaaaatcggcgaggaagcg
agaaaggcgggaatacggctaagcatacacgctccttattatataaatctgtcgtcttcc
gaagaggaaaaaagggaaaactcaatccagtacattttgaatacctgtcgcgtggcaaaa
tggatgggagcggaccggattgtaatacatcccggctcggttggcagattttcgagggag
gaggcaatgatgaaagcccttcctgtgctggcggaggcggtaaaaagggccgacgaagcc
ggattttcggacataaccctttgccctgaggttctggggaaaatgaataatctgggttcc
cttgaagaagtgctgataatgtgcaggctggacgacaggcttattccgtgcattgatttc
gggcatctccatgcgaggactctcggttcccttaccggtattgacgattttaatgccgtt
ttcgataaaatcgagaattccataggtgccgaaagagccaagaaaattcacatacatttc
agccggattgagtttacccaggccggggagaaaaaacaccataccatggatgatacggag
tacggtcctgatttcgagcttttagcgagggttcttgtggaaaggaaaacagaaccggtg
ataatatgcgaatcaagggacagaatggctgaagacgccgtgattcttaaaggtatatac
gagagagtgaaaaacggttgttccgtataa
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