Thermoclostridium stercorarium subsp. stercorarium DSM 8532: Clst_0593
Help
Entry
Clst_0593 CDS
T02527
Name
(GenBank) helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
csd
Thermoclostridium stercorarium subsp. stercorarium DSM 8532
Pathway
csd03420
Nucleotide excision repair
csd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Clst_0593
03430 Mismatch repair
Clst_0593
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csd03400
]
Clst_0593
Enzymes [BR:
csd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Clst_0593
DNA repair and recombination proteins [BR:
csd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Clst_0593
MMR (mismatch excision repair)
Other MMR factors
Clst_0593
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
PhoH
SLFN-g3_helicase
UvrD_C
UvrD_C_2
AAA_30
AAA_22
DEAD
nSTAND3
AAA_16
ResIII
NACHT
Motif
Other DBs
NCBI-ProteinID:
AGI38690
UniProt:
L7VQ10
LinkDB
All DBs
Position
656291..658540
Genome browser
AA seq
749 aa
AA seq
DB search
MEDRERAYEEKRLARTLDEIERQLRQMTEIERAFVNNMRTTYKNMWKEVVAAPNDLQDMD
QLVAAKLYLDEMRNLETTYKSAQQRIIQLRKMLNSPYFARIDFVENGEDSAEQIYIGIAM
VQDEESLEIFVYDWRAPISSMFYDYERGPAGYNTPAGRVEGELILKRQFRIENGKLKFMF
DSDIKIDDDILQEVLGRSRDEKMKTIVTTIQREQNRAIRDEGHRLLIVEGPAGSGKTSIA
LHRVAFLLYRYRDSITNDSVVILSPNDIFNDYISEVLPELGEENVRQTTFMAFAKDFLKT
NMVVTDLNEQMEYMLSAGNSEEYGIRIKSMKYKSSVEFLRKLQDYVNRLYDNPWDFEDFE
TNNTVIISAEEQKKLFIGDYTYLPLIPRLKKVRNRVLYLIKQQEYKEIARLNEKLKKDPV
MMERNANERMKIAVRTVLKRFKPLREKARQIGNISLIDAYRRIFEDAMDGDFSDVARFTL
EQLDQGILLYEDLAPVLYLKAKMFGIPSQENIRHVVVDEAQDYTPIQMEFIREMFPQSNF
TVVGDLNQSINPYANIENTDILKGLFRTDSISHIKLTKSYRSTCEITRFANYIAGIEGDA
GLVNRTGELPSVKIVRSVDECVDGIKRDIKNMISEGFRSMAVITRNRAEAETIHRLLSES
VKCNLVTDPEAVFPHGITVIPSYLSKGLEFDVVFVLNLDIPYSGKEEKSLFYTICSRALH
RLFIYSLGKLPEYLNGMPEDAYVLSGPYC
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atggaagacagggaaagggcttatgaggaaaaaagactggcacggacccttgacgagata
gaacgccagctgcggcagatgactgagatagaacgggcttttgtcaacaatatgcgcaca
acctataaaaacatgtggaaagaggtcgtggcggcaccaaacgacctgcaggatatggat
cagcttgtcgcagcaaaactttacctggacgagatgagaaaccttgagactacttataaa
agcgcgcagcagagaataattcagctcaggaaaatgctgaacagcccttatttcgccaga
atagatttcgtggagaacggcgaagacagcgccgagcagatatatatcgggattgcaatg
gttcaggacgaagaatcccttgagatatttgtatatgactggcgtgctcctatatcaagc
atgttttatgactatgaaaggggaccggccggttacaatacccctgcagggcgtgttgaa
ggggaactgatacttaaaaggcagttccggattgaaaacggaaaattgaaatttatgttt
gactcggacataaagattgatgatgacatattgcaggaagtccttggacgaagcagggac
gaaaaaatgaaaaccattgttacaaccattcagcgggaacagaacagggcgataagggat
gaagggcatagactgctgattgtggaaggccctgcgggcagcggtaaaacatccattgcg
ctgcacagggttgcgtttcttctgtaccgttacagggacagcattaccaatgatagcgtg
gttatactttcgccaaacgacatttttaacgactatatttccgaagtattgcccgaactg
ggtgaggaaaatgtaaggcagaccacttttatggcgtttgcgaaggatttccttaaaaca
aacatggttgtgaccgatctgaacgaacagatggaatatatgctgagtgccggtaacagc
gaagaatacggtatcaggataaagtccatgaaatacaagtcatcggttgaatttttaagg
aagctgcaggattatgtaaatcggctttacgacaatccgtgggattttgaggactttgaa
acaaataatacggtcattatttcggcagaggagcagaagaaactttttataggtgactat
acctatcttccgcttatacccaggcttaaaaaggtaaggaaccgtgtgctgtaccttatc
aagcaacaagagtataaggagattgccagactcaatgagaaactgaaaaaagatccagtc
atgatggagagaaatgccaatgaaagaatgaaaattgccgtaagaacggtgctgaagcgt
tttaaacctctgcgtgaaaaagcaaggcaaatagggaatatttctcttatcgatgcctac
aggagaatatttgaagacgcaatggacggggatttttccgatgtggcgaggtttaccctt
gaacagttggatcagggtatactgctttatgaagacctggcgccggtgctttatcttaaa
gccaaaatgttcgggataccctcccaggaaaacatcaggcatgttgtagtggacgaagcc
caggattatactcccatacagatggaatttatccgtgaaatgtttcctcaaagtaatttt
accgtcgtcggggatttaaaccagagtatcaatccgtatgccaacattgaaaacaccgat
attctgaaaggtttgttccggaccgacagtatatcccatataaaactgacaaaaagctac
cggtcaacatgtgaaataaccaggtttgcaaactatatagccggaattgaaggtgatgcg
ggactggtgaacagaacaggggaattgccgtcggtgaagattgtacggtcggtggatgag
tgtgtggacggaataaagagagacataaaaaacatgatttcagaaggcttcagatctatg
gccgtaattacaaggaacagggccgaagccgaaacgatacaccgtcttttgtcggaatcg
gttaaatgcaatcttgtaaccgaccccgaagctgttttcccgcacggtataaccgtgata
ccttcgtatctctcaaagggactggaatttgacgtggtttttgtattgaatctggatatt
ccgtacagcggaaaagaagaaaaaagcttgttttacacgatatgcagcagggcactccac
cggctgttcatatattctctgggcaaactgccggagtatttgaacggcatgccggaagac
gcatatgtcctgtctgggccgtattgttga
DBGET
integrated database retrieval system
