Thermoclostridium stercorarium subsp. stercorarium DSM 8532: Clst_1043
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Entry
Clst_1043 CDS
T02527
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
csd
Thermoclostridium stercorarium subsp. stercorarium DSM 8532
Brite
KEGG Orthology (KO) [BR:
csd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csd03016
]
Clst_1043
Enzymes [BR:
csd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Clst_1043
Transfer RNA biogenesis [BR:
csd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Clst_1043
Prokaryotic type
Clst_1043
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA
UPF0113
PUA_3
Motif
Other DBs
NCBI-ProteinID:
AGI39114
UniProt:
L7VR82
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All DBs
Position
1183845..1184756
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AA seq
303 aa
AA seq
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MNGILLVIKPPGMTSFDVVAYLRKILKVKKIGHAGTLDPSAGGLLPVCLGKATKAIERFL
NFDKSYRAEMVLGVVTDTQDAEGRVLEKKDVTLDDTAIIEAVNSFKGKYGQIPPMYSAIK
VNGRKLYDLARQGIEIQREPRQVEISEIKVIDIKRRDGVVAVRFDVDCSKGTYVRTLCHD
IGQRLGCGAHMSFLIRTRVGPFPLTEGITLEEINDRLEKGTLSSVIRPVDILFNDYNRVV
VEGRALPGFLNGAPVVLHKFTTLKNNEAVRVYAETGAFLGLGRILVRGNKMILRPDKLFV
SGV
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgaacgggatactgctggttataaagccgccgggtatgacgtccttcgatgtggtggcc
tatttaaggaaaattttgaaggtaaagaagatcggtcatgcggggacattggatccctcg
gcgggcggtcttcttcctgtttgtttgggaaaagccacaaaagccattgaacgttttttg
aattttgacaaatcctatcgtgccgaaatggtactgggagtggttaccgatacccaggac
gccgagggaagggtattggaaaaaaaagatgtaacgttggatgataccgccattattgaa
gcagtgaattcatttaaaggaaagtacgggcagattccgccgatgtattcggcgataaag
gtcaacggacggaaattgtatgatcttgcacggcaggggattgaaatacagcgggaaccc
cggcaggttgaaatttctgaaattaaagtaatcgatataaagcggcgggatggcgttgtg
gctgtgagatttgacgtggactgttcaaagggtacgtatgtcaggactctgtgccatgat
ataggtcagaggctcggatgcggcgcacatatgtcctttctgatacgcacaagggttggg
ccttttccgttaaccgaaggaataacccttgaagaaataaatgacaggctggagaaagga
accctgtcatctgttatcaggccggtggatattttatttaacgattataaccgtgtggtt
gttgaaggaagagcattgccgggatttttgaacggtgcgcctgttgttctgcacaaattt
acaacgctgaagaataacgaagcggtaagggtatacgcggaaacgggagcattcctcgga
ctgggcagaattctggttcgtgggaataaaatgattttgcggcctgacaaactctttgta
tccggtgtgtaa
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