Thermoclostridium stercorarium subsp. stercorarium DSM 8532: Clst_1340
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Entry
Clst_1340 CDS
T02527
Name
(GenBank) DNA topoisomerase-1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
csd
Thermoclostridium stercorarium subsp. stercorarium DSM 8532
Brite
KEGG Orthology (KO) [BR:
csd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csd03032
]
Clst_1340
03400 DNA repair and recombination proteins [BR:
csd03400
]
Clst_1340
Enzymes [BR:
csd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Clst_1340
DNA replication proteins [BR:
csd03032
]
Prokaryotic type
DNA Topoisomerases
Clst_1340
DNA repair and recombination proteins [BR:
csd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Clst_1340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Zn_ribbon_recom
Zw10_N
PSV_ORF131-like_dom
Cas_Cas4
Toprim_4
zf-CRD
Lar_restr_allev
Motif
Other DBs
NCBI-ProteinID:
AGI39401
UniProt:
L7VS24
LinkDB
All DBs
Position
complement(1499605..1501737)
Genome browser
AA seq
710 aa
AA seq
DB search
MAKYLVIVESPAKAKTIKKFLGSNYKIKASMGHVRDLPKSHMGVDIEHGFEPKYINIRGK
GDLITELKKEAKESERVFLATDPDREGEAISWHLANIFQIDSNEKCRITFNEITKNAVLK
ALQAPRPIDMNLVNAQQARRVLDRIVGYKISPLLWKKVKKGLSAGRVQSAAIKIICDRER
EIENFIPEEYWTIETLLSKEDGRTFTAKFSGLVNEKIELKTREDVDRILGNIENKEFTIR
NIKRSEKKRTPSPPFITSTLQQDAARKFGFSAKKTMMLAQQLYEGVEIEGEGSVGLITYM
RTDSTRISDEALNAAREYILKNYGEKYLPEKPRVFKAKSGAQDAHEAIRPTLLEFTPERV
KDSLSRDLYRLYKLIWDRFIASQMESALYDTMSVEITCGDYLFKASGSRIAFKGFLVLYE
EGKDDDNGEESDETGILLPELTEGEVVKPVEIKPAQHFTQPPPRYTEATLVKTLEEKGIG
RPSTYAPIISTIMSRGYVVKEKKYLYPTELGKIVNSLMEEHFKEIVDVNFTAKMETQLDL
VEEGKLEWKNLLNEFYSEFSKTLKAAEESINKVELPVEESDEICEKCGRRMVIKTGKYGK
FLACPGFPECRNAKPLFDDAGVKCPKCGGKVLIKKTKRGKSYLGCENYPECDFSTWDMAS
DKKCPKCGNFMTKRFKGKMIQYTCSLSSCGYEFEEERKQSENKSENNGND
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaatatcttgtgattgttgaatcaccggccaaggcaaaaacaataaaaaagttt
cttggctcaaattataagataaaagcctctatggggcatgttcgggatcttcctaaaagc
cacatgggagttgatatagagcacggttttgaaccaaagtacatcaatatacgcggtaaa
ggtgatttaatcacggagctgaaaaaggaagcgaaagagtcagaaagagtgtttcttgca
accgaccccgatcgcgaaggggaagcaatttcatggcatctggctaatatttttcaaatt
gacagcaatgaaaaatgtagaattacttttaatgaaataactaaaaacgcagttttaaaa
gctctgcaggcaccaagacccatagacatgaatcttgtcaacgcccagcaggcgcggcgt
gttcttgacagaatagtgggctacaaaataagccctcttttgtggaaaaaagtcaaaaaa
ggtttaagcgccggcagggttcagtctgctgcaataaaaattatttgcgacagggaaagg
gaaattgaaaatttcatacccgaagaatactggaccattgaaactttgctcagcaaagag
gacggcaggaccttcactgcaaaatttagcggtttggtcaacgaaaaaattgagctgaag
acacgggaagatgtggatcgtattcttggaaatattgaaaataaggagtttacaatacgg
aatataaaacgcagtgaaaagaaacgtaccccgtccccgccgttcattaccagcacgctc
cagcaggatgcagcaagaaaattcggtttttctgcaaagaaaacaatgatgctggcgcag
cagctgtatgaaggtgttgaaatagaaggagaaggttccgtgggtctaatcacatacatg
cgtactgactcaacacgtatatctgatgaggctttgaatgccgcaagggaatatatactg
aagaattacggggaaaaatatcttccagaaaaaccaagagttttcaaggccaaatcgggt
gcgcaggacgcccatgaggcaataaggccgacgttgcttgaattcacacctgaacgggtc
aaagattcgctttcacgggatctttacagactgtataaacttatctgggacagatttatc
gccagtcagatggagtcggcgttgtatgatacaatgtctgtcgaaattacctgtggtgac
tatttgttcaaagcgtcaggatcaaggattgccttcaagggttttcttgtactttatgaa
gaaggcaaggacgacgataacggggaagaaagcgatgaaacgggcatattgcttcctgag
ctgaccgagggagaagtggtaaaaccagttgaaataaaacccgctcagcattttacccag
ccgcctccaaggtataccgaggcaaccctggtaaaaacccttgaagaaaagggaataggc
cgtccgagtacgtacgctccgataatcagtacaataatgtccaggggatacgtagttaag
gaaaagaaatatctttatcccaccgaattggggaaaattgtaaacagtctgatggaggaa
cattttaaagagatagtggacgtgaattttacggcaaaaatggagacacagcttgacttg
gtggaagaaggaaaacttgaatggaaaaatcttctgaatgaattctacagcgaattcagt
aaaacgctgaaagcagcggaagaaagcattaacaaggtcgaacttcctgtcgaggaatcg
gacgaaatatgcgaaaaatgcggacgcaggatggttataaagaccggaaaatacggcaag
ttccttgcctgtcctggttttcccgaatgcagaaatgcaaagccgctttttgacgacgcc
ggtgtcaagtgcccgaaatgtggcggaaaggttcttatcaagaaaacaaaaaggggaaag
agctatctgggctgcgaaaattatcccgagtgcgacttttcaacatgggatatggcttct
gacaaaaagtgtccaaaatgcggaaactttatgacaaagagatttaaaggcaagatgatt
cagtatacctgcagtctgagctcctgcggatatgagtttgaggaggaaaggaaacagtct
gaaaacaaatctgaaaacaatggaaacgattaa
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