Thermoclostridium stercorarium subsp. stercorarium DSM 8532: Clst_1439
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Entry
Clst_1439 CDS
T02527
Name
(GenBank) DNA polymerase-3 catalytic subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
csd
Thermoclostridium stercorarium subsp. stercorarium DSM 8532
Pathway
csd03030
DNA replication
csd03430
Mismatch repair
csd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Clst_1439
03430 Mismatch repair
Clst_1439
03440 Homologous recombination
Clst_1439
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csd03032
]
Clst_1439
03400 DNA repair and recombination proteins [BR:
csd03400
]
Clst_1439
Enzymes [BR:
csd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Clst_1439
DNA replication proteins [BR:
csd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Clst_1439
DNA repair and recombination proteins [BR:
csd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Clst_1439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
DNA_pol_IIIA_C
HHH_3
Motif
Other DBs
NCBI-ProteinID:
AGI39498
UniProt:
L7VK21
LinkDB
All DBs
Position
complement(1609292..1612951)
Genome browser
AA seq
1219 aa
AA seq
DB search
MGSFVHLHVHTEYSLLDGANRIEPLVKRVRELGMDSVAITDHGAMYGVIDFFKACRKEGI
KPILGCEVYTAARTRFDREAGIDSEQGHLVLLAKDNKGYKNLMKLVSAAFTEGFYYKPRI
DMELLNRYHEGLIGLSACLAGDIPAAILNNNYEKARKLALQFEEIFGRGNFYLELQHNGI
EEQKLVNEGLIRLSRETGIPLVATNDVHYLRKEDARAHEILMCVQTATTIEDEEHMQFRT
DELYLKPPEIMQKQFSYCPEAIENTVKIAEMCNVELEFGKLHLPKFDVPGNEDAYEFLKK
QCIKGFERKYRNHQDKDKLLERLNYELSVIKNMGYVDYFLIVWDFIRFAKENHIMVGPGR
GSAAGSMVAYCLDITNVDPIRYDLIFERFLNPERISMPDIDVDFCFERRGEVIDYVVNKY
GKDRVAQIITFGTLAARAAIRDVGRALAIPYAEVDRVAKMIPMQLGMTIEKALEINSELK
NAYENEPRVHELISTAMILEGMPRHASTHAAGVVISSEPITEYVPLYQSEGNVCTQFPMT
TLEELGLLKMDFLGLRTLTVIRDTVKMVEENHGVKIDIDKIDLNDAEVYQMISRGETAGV
FQLESPGMTQFMTELKPSCIEDIIAGISLYRPGPMDQIPKYIRNKRNPENIKYAHPLLEP
ILNVTYGCMVYQEQVMQIVRSLAGYSLGRADLVRRAMAKKKKEIMEEERQRFVYGETDAD
GNVLIPGAIRNGVDEKTANEIFDEMMDFASYAFNKSHAAGYAIIAFQTAYLKHYYPVEFM
AALLNSFLGSPNKISQYVLECKRMGIQVLPPDINESGERFTVHNGKIRFGLTAVKNVGSS
VVKQIIAERSKNGPYKSFIDLCERVDSRDLNKRCIESLIKSGAFDSFGVYRSRLMNSYEK
IIEDISNERKEKIDGQMSLFDIASGAEISKVHEIPYPDMEEYDFRLLLAMEKEVLGLYVS
GHPLSEFEEEIRKGVTLYSSDLIIEENNAEHINSKFADGSFARIAGIIADVKTITTKSNQ
LMAFVTVEDLTGQMEVIVFPSILEKYGELIKPELPVWIEGKLSIREDEQPKIIVETIKLL
VKGSSFPNAPGKNKDGASDVQAGGNDKFDNTKTLVADENVYEDHENENRNGLTKGSDIEK
YQTYTELVKVRIPDDTDRKIISAICSLLKYFEGTSPVYLYYRGMINKKYHVWICDTLLNE
LKNFVGEQNVKHEKRILQP
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgggttcttttgttcatttgcatgtacataccgaatacagccttctcgacggtgcaaac
cggattgagcctcttgttaaaagagtcagggaactgggaatggacagtgtcgcgataacc
gatcacggcgcaatgtacggcgttattgactttttcaaggcctgcaggaaagaaggcata
aagcctattttggggtgcgaggtgtataccgccgcccgaacaagatttgacagggaagct
gggattgattcagagcaggggcatcttgtactgctggctaaggacaacaaaggctataaa
aatctgatgaaactggtttcagcggcatttaccgagggcttttactataagccgagaata
gacatggaactgctgaacaggtatcacgaggggctgattggtttaagtgcatgcctcgca
ggggatatacccgctgcaattctgaacaataattacgaaaaagcaaggaagcttgccctc
cagttcgaggaaatattcgggaggggaaatttctaccttgagctccagcataacggtata
gaagagcagaagcttgtaaacgaagggcttataaggctgtcaagagaaacaggaattccg
cttgtggcgacaaatgacgtccattatctgcggaaagaggatgcaagagcccatgaaatt
ctgatgtgcgtgcagactgcgacgaccattgaagatgaagagcatatgcagttcaggacc
gacgaactgtacctgaaaccgcccgaaataatgcagaagcagttcagttactgcccggag
gcaatcgaaaacactgttaaaattgcagaaatgtgcaatgtggagcttgaattcggcaaa
ctgcatttgccgaaatttgacgttccgggcaatgaggatgcctatgaatttctaaaaaaa
caatgcataaagggttttgaaaggaaataccggaatcatcaggataaagataaactcctt
gagcgacttaactatgaactgtcggtaattaaaaacatgggatatgtggattatttcctg
atagtatgggatttcatacgctttgcaaaggaaaaccacataatggtaggcccgggaaga
ggttcggctgcaggaagcatggtcgcttactgcctggacattacaaatgtggatccgata
cgttatgatctcatctttgaacgttttttgaaccctgagcgtatcagtatgcccgatatt
gatgtggatttttgttttgaacgccgtggtgaagtgatcgattatgtcgtcaacaagtat
ggaaaggaccgggtggctcagattataacctttggtacactggcggcgcgtgctgcaata
agggatgtgggacgtgcccttgccattccgtatgctgaagttgacagagtggcgaaaatg
attccgatgcaactggggatgacaatagaaaaggctctggaaatcaacagtgagcttaaa
aatgcttacgaaaacgagccgcgcgtgcatgaacttataagcaccgcaatgatcctggaa
ggcatgccgcggcatgcgtcaactcatgctgctggtgttgtgatttccagcgagcctata
acggaatatgtgcctttgtaccaaagcgagggaaacgtatgtacccagttccccatgaca
accctggaggaactcggccttttaaaaatggattttctgggtttaaggactctaacagta
atccgggataccgttaaaatggttgaagaaaatcatggggtgaaaatagacatcgacaaa
attgatttaaatgatgccgaggtctatcagatgatcagccgcggtgaaacggccggagta
ttccagcttgaaagtccgggcatgactcagtttatgaccgaacttaagccgtcatgcata
gaagacatcatagcgggtatttctctttacaggcccggcccgatggatcagatacctaaa
tatattcgaaacaagagaaatcctgaaaatattaaatatgcccatccgcttctcgaaccg
atactgaacgttacttacggatgcatggtgtaccaggaacaggtaatgcagatagtccgt
agtcttgcgggttattctctcggacgggccgatctggtgcgccgggcaatggcaaaaaag
aaaaaggagataatggaagaagagcggcagaggtttgtttacggtgagaccgacgccgac
ggaaacgtccttataccgggagcaatacgcaacggtgtggatgaaaaaaccgccaacgaa
atttttgatgaaatgatggactttgcaagttatgcatttaacaagtcccatgcggcggga
tatgccattattgctttccaaaccgcttatcttaagcattattacccggttgaattcatg
gctgcgcttctgaacagctttttaggctcgcctaataaaatatcccagtatgtactggaa
tgcaaaagaatgggcattcaggtactgcctccggacataaacgaaagcggagaaaggttt
acggtgcataacgggaaaatccgtttcggcctgactgcggttaaaaacgtcggcagcagt
gtggttaagcagataatcgccgagaggagcaaaaacggcccttacaagagttttatagat
ctctgtgaaagggttgacagcagggatttgaacaaaaggtgcattgaaagccttattaaa
agtggagcttttgattccttcggcgtgtatcgctccaggcttatgaattcttatgaaaag
atcatcgaggatatatcaaatgaacgaaaagaaaagatagacgggcagatgtcactgttt
gatattgcgtcgggcgcggaaatatcgaaagtacatgaaataccgtatccggacatggaa
gaatatgatttcaggcttcttctcgcgatggaaaaagaagtgctgggcctgtatgtttca
gggcatcctttaagtgagttcgaggaggaaatcagaaagggcgttacgctgtattcttct
gatttaataattgaggagaataatgcggagcacatcaacagtaaattcgccgacggttct
tttgcccgtatagccggaatcattgccgatgttaagacaattacgacaaaaagcaatcag
ctgatggcttttgttacggtcgaggaccttaccggacagatggaagttattgttttccca
agtattcttgaaaaatacggcgaacttataaaacccgaattgcctgtttggatagaaggg
aaactgagcatacgtgaagacgaacagccaaaaataattgtggaaacgataaaactgctg
gtaaaaggcagcagttttccaaatgcccccggaaaaaacaaagacggggcatcggatgtt
caggccggtgggaatgataaatttgacaataccaagactttagttgccgacgaaaacgtg
tatgaagatcatgaaaatgaaaaccgaaacggtttgacaaaaggctcagatattgaaaaa
tatcagacctatacagaactggttaaagtgcgtatacccgacgatacagacagaaaaatt
atcagcgcaatttgctcccttcttaagtattttgaagggacaagtccggtttacctgtat
tacaggggtatgataaacaaaaaatatcatgtttggatttgtgatacgttattgaacgag
cttaaaaatttcgtaggcgagcaaaacgtcaaacatgaaaaacgtatactgcaaccgtag
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