Thermoclostridium stercorarium subsp. stercorarium DSM 8532: Clst_2076
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Entry
Clst_2076 CDS
T02527
Name
(GenBank) DNA helicase subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
csd
Thermoclostridium stercorarium subsp. stercorarium DSM 8532
Brite
KEGG Orthology (KO) [BR:
csd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csd03400
]
Clst_2076
Enzymes [BR:
csd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Clst_2076
DNA repair and recombination proteins [BR:
csd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Clst_2076
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
AGI40105
UniProt:
L7VS26
LinkDB
All DBs
Position
complement(2346835..2350311)
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AA seq
1158 aa
AA seq
DB search
MSLRFIYGRAGCGKTRFCLEEIRSRIESGCTGQLYLLVPEQYTFQAEKDLIDLIKPGGIL
KNEVLSFRRLAYKVFNEVGGITYPHIHPAGKSMILYRILDKMDKNLRYFKNSVDKPGFVG
RLSELVKEFKHYNVTFDKLDEICGKLDDRDPLKDKITELKNIYIAFDKTVKERYRDADDD
LTVAAEKMKMSKQFTDSEIWIDGFTDFTPQEYKIIEVLLTQARRVSITLVCDRLDDQTSE
LDVFSPAKKVYRKVLNLAMKNNVAYEPPVFLNPKPLYRFKDNPELAHLESNLNVHPYKVY
PRETENISLFSSVNVFSEIEATAKDILRLCREKGFRFRDIAVVTRNLDEYQGLIEAVFND
YGIPCFLDRKLDISNHPLVILILSMLDIFTENWSYEAVFRYLKSGLTGIEQDRIDRLENY
VLACGIRGNQWTEEKDWNMIPEFFPDENGSGHDEFSLEEINRTRKEIIKPLMEFRYKTKG
RRTAEEFCSALFDFLCYLKIPEQMEAIIEDFRSRGELILANEYSQVWNMVIELMDQIVEV
MADETFGVERFANLIRIGFSEYKIGLIPASVDQVLVGSIERSKSHAVKALYILGTNDGVF
PAKGNEEGILTDDERIKLNEMGLELAKTNREKVFDENFLIYRTLTTPSDYLRISWPIADQ
EGRALRPSIIISQIKKIFPLCKQYSNILPPQSNEEILNEISSRRAAFRQLITVLRQKADG
REILPVWRDIALWYLKNDEWKEEFERARKAFSYRNIAQTVDWDKIKKLYGDTFISSVSRF
ERYSACPFSFFVRYGLKARERKILQFSPPDAGTFLHTAVEKFSRAVQNSRQQGESGALRN
EASQDVITWRTFDRKWCEQKVSEIVDEMLGKMMGTGLSSSKRMVVLANRLKRVVTRSVWL
IAEHIRRSGFDPVDYEAGFGDNEKYPPIVIELDNGEKVFLYGRIDRIDAMDTPEGRYIRI
IDYKSGTKDFRIDNVYYGLQIQLVTYLDAIWDYFSKNGKNVMPAGILYFKLDDPILKTNG
HISEEEVEKAIMKQLRMKGLLLADVKLIKEMDRTIDGQSLIIPASISKSGTLGKNSSVVT
MEQFNILRKYVRRLLKELSTEIFNGAVPILPVKSRYETACKYCSYLPVCQFDASLKENTY
RILYEKDNDEIWNLMKRQ
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgagtttacggtttatatacggaagggcaggatgcggaaaaacgcgtttttgcctggaa
gagataaggtccaggatagaaagcggatgtaccggccaattgtatcttctagttcctgaa
caatatacctttcaggctgaaaaggacctgatagacctgataaagccgggtggaatcctg
aaaaacgaagtactcagtttcaggcgccttgcttataaagtttttaacgaagtcgggggt
attacctatcctcacattcatcctgcgggtaaaagcatgattttataccgcatacttgac
aaaatggacaaaaatttaagatatttcaaaaattcagtagataagccgggatttgtaggc
aggctttccgaacttgtcaaggaatttaaacattataacgtaacctttgataaactggat
gaaatatgcggtaaactggatgacagggatccgctgaaagataaaataaccgagcttaaa
aatatctacattgcctttgacaagacggtaaaggaacgctacagggatgctgatgacgat
cttaccgtcgcagcggagaaaatgaaaatgtcgaaacagtttaccgattcggaaatatgg
attgacgggtttaccgatttcactccgcaggaatataagataatagaggttttgcttaca
caggccagacgggtttcgatcacccttgtatgtgacaggcttgatgatcagacatccgag
ctggatgtcttttcccctgcgaaaaaagtctatcgcaaagttctgaatctggccatgaaa
aacaatgtcgcatatgaacccccggtttttttaaacccgaaacctttataccggtttaag
gataatcctgaactcgcccaccttgaaagcaatttgaatgttcatccgtataaggtttat
ccccgtgaaaccgaaaatatatcgctgttctcctcggtaaatgtcttcagcgaaatagaa
gccacggcaaaggacattttaaggctgtgccgcgaaaaaggtttccggttccgcgacata
gcggtggttacaagaaatcttgacgagtaccaggggttgattgaagctgtatttaatgac
tacggaattccgtgctttctggacagaaaactggatatatcaaatcatccgctggtgata
cttattttgtcaatgctggatatattcacggaaaactggtcatatgaagcggttttcagg
tatttgaaatcagggcttaccgggatagaacaggataggattgacagactggaaaattac
gttcttgcctgcgggatacggggaaaccagtggaccgaagaaaaagactggaacatgatt
ccggaatttttccctgatgagaatggatcgggacatgacgaattttcactggaagaaata
aacagaacacggaaggaaataatcaagccgcttatggaattccggtataaaacaaaaggg
agaaggactgcggaggaattctgctcggcattgtttgattttctgtgttacctgaaaatc
cccgagcagatggaggcgattattgaggatttccgcagcaggggcgaactgatcctggca
aatgaatactcgcaggtatggaacatggtcattgagctcatggaccagattgttgaggta
atggcggatgaaacctttggcgtagagcgtttcgcgaaccttatcagaataggtttttct
gaatataaaatcggattaatacccgcatcggtcgaccaggtgcttgtgggcagcatagaa
aggtcaaagagccatgcggtaaaagcgctttatatcctgggaacaaatgacggtgtcttt
ccggccaaaggcaacgaagaaggaatccttaccgacgacgaaaggattaaactgaatgaa
atggggcttgagctggccaaaaccaaccgggaaaaagtattcgacgagaattttctgatt
tacaggacccttacaacaccttcggattatctgcgcataagctggcctatagccgatcag
gaaggaagagcattaaggccttcgattataatatcgcagataaaaaagatattcccgtta
tgcaagcaatacagcaatattttgccgccccagtccaatgaggagatattgaatgaaata
tcgtcaagacgcgccgctttcaggcaactgataaccgttttgcggcaaaaggccgacgga
agggaaatactgcccgtatggcgggatatagccctgtggtatttaaaaaacgacgagtgg
aaagaagagtttgaaagggccagaaaagcattcagttaccggaatatagcccaaaccgtt
gactgggacaaaatcaaaaagctttacggagatactttcatatccagcgtttcacggttt
gaacgctacagtgcctgtccgttttctttctttgtacggtacggtcttaaggcgagggaa
aggaaaatcctccagttcagcccgcctgatgcgggtacgtttttgcatactgcagtggag
aaattttcacgggccgttcaaaacagccggcagcagggagagagtggcgcgctgcgaaat
gaagcctcgcaggatgttattacatggcggacttttgacaggaagtggtgtgaacagaaa
gtatcggaaatagtggatgaaatgcttggaaaaatgatgggaacagggctttcgtcatca
aaacggatggttgtgctggcaaacaggttaaaaagagtggtgacaaggtccgtatggctt
attgccgaacatatacgcagaagcggattcgatcccgttgactatgaagccgggtttgga
gacaatgaaaaatatcctccgattgtgattgagcttgacaacggcgaaaaggtttttctg
tacggacgaattgaccgaattgacgcgatggatacgcctgaaggaagatacatccgcata
atcgattacaagtcggggacaaaggatttcagaatcgacaatgtatattacggtttacag
atacaactggttacataccttgacgcaatatgggattatttttcaaagaacgggaagaat
gtaatgccggcgggtatactttatttcaaactggatgatccgatattgaaaacgaacggg
catatatccgaggaagaagttgaaaaggcaatcatgaaacagttgcgtatgaaagggttg
ttactggccgacgtgaaactgattaaggagatggatcgtacgattgacggacagtcattg
attattcccgcatcgatcagtaaaagcggaactttgggcaagaactcatcggttgtgaca
atggaacagtttaatatcctgcgcaaatatgtacgcagacttctgaaggaattaagtaca
gagatctttaacggggcggtccctatattgccggtgaaaagcaggtacgagaccgcctgc
aagtactgcagctaccttcccgtatgccagtttgatgcctcgctgaaggaaaacacctat
cgtattctgtatgaaaaagacaacgacgagatatggaatcttatgaaaaggcagtga
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