Thermoclostridium stercorarium subsp. stercorarium DSM 8532: Clst_2308
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Entry
Clst_2308 CDS
T02527
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K03090
RNA polymerase sigma-B factor
Organism
csd
Thermoclostridium stercorarium subsp. stercorarium DSM 8532
Brite
KEGG Orthology (KO) [BR:
csd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csd03021
]
Clst_2308
Transcription machinery [BR:
csd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Clst_2308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_3
HTH_11
Sigma70_ECF
HTH_28
MarR
RPC3_helical
HTH_17
HTH_Mga
GLTSCR1
HTH_37
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
AGI40331
UniProt:
L7VSM2
LinkDB
All DBs
Position
complement(2604413..2605165)
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AA seq
250 aa
AA seq
DB search
MDKNKENRHEVSDKELFEQYRKTKDVNIRNEIVSRYLYLAEILAKKFINRGVEYDDLYQV
ACMALINAVERFDVNANVKFVSFATPTIIGEIKRYFRDKASVIRVPRRIYEIYQKVNQTR
ELLMQKNGRAPRVDEIAEYLNLSEETILEIIESWNVYKIQSFDQTIYDDDDVELHEAIGE
DDETFEKINNRDFLEKSLKHFNETEKKFIRLRYFENKTQKEIAENFNVSQMYISRLERKT
LEKFRRILKK
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaataaggaaaaccggcacgaagtttcggataaggagttgtttgagcagtat
agaaaaaccaaggacgtaaacatacgtaatgagattgtttcccggtatctgtatcttgct
gaaattcttgcgaaaaaatttatcaaccggggtgtggaatacgatgatttgtatcaggtt
gcctgcatggcgcttattaatgccgttgaacgttttgacgtgaatgccaatgttaagttc
gtaagctttgcaacgcctacaattataggcgaaattaagcgttatttccgtgacaaggct
tcggtaataagggtaccgagaagaatatatgagatataccagaaagttaaccagaccagg
gaactgcttatgcagaaaaacggaagggcgccgagggtggacgagattgcggaatatctg
aacctcagcgaagagacaattctggaaataattgaatcatggaatgtatataaaattcag
tcctttgatcagacgatttatgatgatgacgatgtggagcttcatgaggccataggcgag
gatgacgagacatttgaaaaaattaacaacagggatttccttgaaaaatcgctgaaacat
ttcaatgagaccgaaaagaaatttatcaggctaagatactttgaaaacaagacccaaaag
gaaattgccgaaaattttaacgtatctcagatgtatatttcaaggctggaacgaaaaact
ttggagaaattcagaagaattctgaaaaaataa
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