Thermoclostridium stercorarium subsp. stercorarium DSM 8532: Clst_2400
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Entry
Clst_2400 CDS
T02527
Symbol
pcrA
Name
(GenBank) PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
csd
Thermoclostridium stercorarium subsp. stercorarium DSM 8532
Pathway
csd03420
Nucleotide excision repair
csd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Clst_2400 (pcrA)
03430 Mismatch repair
Clst_2400 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csd03400
]
Clst_2400 (pcrA)
Enzymes [BR:
csd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Clst_2400 (pcrA)
DNA repair and recombination proteins [BR:
csd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Clst_2400 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
Clst_2400 (pcrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
ResIII
DEAD
Beta-prop_WDR5
Motif
Other DBs
NCBI-ProteinID:
AGI40421
UniProt:
L7VS37
LinkDB
All DBs
Position
complement(2705281..2707479)
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AA seq
732 aa
AA seq
DB search
MNLIQGLNPQQKEAVLHTEGPLLVLAGAGSGKTRVLTHRIAYLIEEKGVSPYNILAITFT
NKAAGEMKERLEKLIGTKALDVWAGTFHSCCVRILRREIERIGFGRNFVIYDTSDQETLM
KDCISQLQYNEKLFPPKMVLAEIGRAKDELIDPEKYAIMAGSDFRLSKIARLYELYQKKL
KANNALDFDDIIMYTLKIFDDFPEVLEYYQNKFKYILVDEYQDTNTAQYVLVSMLAQKHR
NVCVVGDDDQSIYGWRGANIRNILEFEKDFKGCRVIKLEQNYRSTANILNAANNVIKNNF
GRKPKTLWTENGEGDKVRVYEALDEKEEAYFVANQIKSEVRKGRRSYRDFAVLYRINAQS
RVFEDAFMKNGVPYKIIGGHKFYDRKEIKDIIAYLKVIQNPHDDISLKRIINVPKRGIGK
ATIDKAEQLAITHGVSIYSVIVQPENFPELARAAEKLKSFTDTLARFRTMLSYMDLVEWI
RMLVEESGIIRELEAEGTEEAKSRIENIREFQSVAVEFVNNSEETNPTVEDFLAQISLVS
DVDDLNEEDDRVVLMTMHSAKGLEFPVVFLTGMEEGLFPGMRSFGSESEMEEERRLCYVG
ITRAKENLYLTYAKTRMLFGNTTYTRPSRFIDEIPPELLDYAENRPFNDGISVLNNRLIG
AETWKQRTASFSQAQETDPCDIEVGARVIHKKFGEGTVIKKEREGSDYKLEIIFDEYGLK
RMMASFAKLKLL
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttattcagggattgaacccacagcagaaagaagcggtattgcataccgaaggc
ccgttgctggttctggcgggagccggttcggggaaaaccagagtactgacccaccgtatt
gcttatttgatagaagaaaaaggagtttcgccgtataacattctggcgatcacctttacg
aataaagccgcaggggaaatgaaagaacggcttgaaaaactgattggtacaaaagccctt
gatgtatgggcgggtacttttcattcctgctgtgtaagaatattaaggcgggaaatagaa
cgcatcgggtttggccggaattttgtcatatacgacacttctgatcaggagacactgatg
aaggactgtatcagccagcttcagtacaatgaaaaactttttccgccgaaaatggtgctg
gcggagattggtagggcaaaggatgaactgattgatcctgaaaaatacgccataatggca
ggttcggatttcaggctcagcaaaatagcaaggctttatgagttgtaccagaaaaaactg
aaggccaacaatgccctggattttgacgatattataatgtatactctgaaaatatttgat
gattttccggaagtactggaatattatcagaataagtttaaatacatccttgtggacgaa
tatcaggatacaaacaccgcccagtatgtactggtgagcatgctggcgcagaagcacagg
aatgtctgcgtggtcggcgacgatgaccagtcaatatacggctggcgcggagcgaatata
cgcaacattctggagtttgaaaaggactttaaaggatgccgggtaataaagcttgagcaa
aattacagatcaacggccaatatattgaatgcggcgaataacgttattaagaacaacttt
ggccgcaagcccaagacactgtggaccgaaaacggggaaggggataaggtacgggtatat
gaagcgctggacgaaaaggaagaggcttactttgtggctaatcaaattaaaagcgaagta
aggaaaggcagacgaagttaccgggattttgccgtcctttatagaataaacgcccagtcc
cgcgtttttgaagatgcgtttatgaaaaacggtgtaccgtataaaataatcggcggccat
aaattctatgatcgcaaggaaataaaggatattattgcatatctcaaggttatacagaat
ccgcacgacgacataagcttaaagaggataattaacgtgccgaaaagaggtatcggcaaa
gccaccatcgacaaggccgaacaactggcgataacccacggcgtaagcatttattcggtg
atagtgcagcctgaaaatttcccggaacttgcgcgggcggcggaaaaacttaaatcattt
accgatacgctggcaaggttcaggacgatgctttcatatatggatttggtggaatggatt
agaatgcttgttgaagaaagcggtattattcgcgaactggaggccgaaggaacggaagag
gcaaaaagcaggattgaaaacatccgggagttccagtcggtggcggtggagtttgtaaat
aacagtgaagagacaaatcccaccgtcgaggattttcttgcacaaatctcccttgtttcg
gatgtggatgatttgaacgaagaggatgaccgggttgtgctgatgacaatgcacagcgcc
aagggacttgaatttccggtggtgtttcttacgggtatggaggaaggtcttttccccggt
atgcgatccttcggttcggaaagcgagatggaggaggaacgcaggctctgctacgttggg
attacaagagcaaaggaaaatctttaccttacctatgcgaaaacaagaatgctgtttgga
aatacaacatatacaagaccttccagatttattgacgaaattccgccggaattgctggat
tatgctgaaaacaggcctttcaacgacggcatttccgtactgaataaccggttaatcggc
gccgagacgtggaaacagcgtactgcgtcgttttcgcaggcacaggaaacagatccctgt
gatattgaagtcggggcccgtgttatacataaaaagttcggtgagggcacggtaataaaa
aaagaacgggaaggatcggattataaactggaaataatctttgacgaatatggtctgaaa
aggatgatggcttcttttgcgaaactgaagctgttatga
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