Caulobacter segnis: Cseg_0223
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Entry
Cseg_0223 CDS
T01221
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cse
Caulobacter segnis
Pathway
cse03030
DNA replication
cse03410
Base excision repair
cse03420
Nucleotide excision repair
cse03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Cseg_0223
03410 Base excision repair
Cseg_0223
03420 Nucleotide excision repair
Cseg_0223
03440 Homologous recombination
Cseg_0223
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cse03032
]
Cseg_0223
03400 DNA repair and recombination proteins [BR:
cse03400
]
Cseg_0223
Enzymes [BR:
cse01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Cseg_0223
DNA replication proteins [BR:
cse03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Cseg_0223
DNA repair and recombination proteins [BR:
cse03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Cseg_0223
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cseg_0223
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Taq-exonuc
CITED
Motif
Other DBs
NCBI-ProteinID:
ADG08745
UniProt:
D5VH87
LinkDB
All DBs
Position
243602..246502
Genome browser
AA seq
966 aa
AA seq
DB search
MFAAMTDVVSESPPAAHLTQDGPALRLFLVDGSAYLFRAYHALPPLTRKSDGLPVGAVQG
FCNMLWKLLRDMQGDTPTHLAVIWDHSEKTFRNTLYDQYKAHRPPPPEDLIPQFPLVREA
TRAFGVPAIELPGYEADDLIAAYACKAREVGGEAVIVSSDKDLMQLVGDGVSMFDPMKNV
RIEREQVFEKFGVYPEQVVDVQALCGDSVDNVPGAPGIGIKTAAQLITEFGDLDTLLERA
GEIKQPKRRETLINFADQIRLSRALVKLDCDTPLPEPLDDLKVREPDKEVLAAFLDQMEF
RSLARRVGDGSAAAVPGSLDRPAAPPKAPVSTVSYMGAAARAAAQPVAEPVTIDHAAYAC
VRDLETLRAWVDKATAKGVVAFDTETDALSSATAGLCGVSLAIAPGEACYIPVGHCEKEG
LALEAAADLVQIPLADVIATLKPLLEDPAVLKVAQNAKYDIAVLARHGIQVSPIEDTMLI
SYVLEAGLHGHGMDELSELWLGHKPIPFKQVAGTGKAQISFKHVALSEATAYAAEDADVT
LRLYETLKPRLAREGLLTVYETLERPMPAVLAAMENDGIKVDPEALRRLSNEFSLRMAEF
EARATELVGRPFNLGSPKQIGDVLFGEMQIKGGKKTATGQWSTDSDVLESLALEHELPRV
LLDWRQLSKLKGTYTENLVAAIAERTGRVHTSYALAATTTGRLSSSDPNLQNIPVRTEEG
RKIRKAFIAPQGKVLISADYSQIELRLLAHIGDIPQLKRAFQEGLDIHAMTASEMFDTPI
EGMDPMIRRRAKAINFGIVYGISAFGLANQLGIPQGEAGAYIKTYFERFPGIQAYMDATK
AFVREHGYVTTIFGRKINIPEIQAKSVGQRQFAERAAINAPIQGAAADVMRRAMIRMPEA
LQAAGLSARMLLQVHDELVFEAPEAEAETARGVIANVMEKAAEPAVALSVPLTVEVRAAH
NWDEAH
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgttcgcggccatgaccgacgtcgtttccgaatccccgcccgccgcgcacctgacccag
gatggtccggcccttcgcctcttcctggtcgacggctcggcctatctgttccgcgcctat
cacgccctgccgccgctgacgcgcaagagcgacgggctgccggtcggggcggtgcagggc
ttctgcaacatgctgtggaagctgcttcgcgacatgcagggcgacacgcccacgcacctg
gccgtgatctgggaccattcggaaaagacgttccgcaacacgctctacgaccagtacaag
gcccaccgtccgccgccgcccgaggacctgatcccgcagttcccgctggtgcgggaagcg
acgcgggccttcggcgtgcccgcgatcgagctgccgggctacgaggccgacgacctgatc
gccgcctatgcctgcaaggcccgcgaggtcggcggcgaggcggtgatcgtctcgtccgac
aaggacctgatgcagctggtcggcgacggcgtctcgatgttcgaccccatgaagaacgtc
cgcatcgagcgcgagcaggtgttcgagaagttcggcgtctatccggagcaggtcgttgac
gttcaggccctgtgcggcgacagcgtcgacaatgtgccgggcgcgccgggcatcggcatc
aagaccgccgcccagctgatcaccgagttcggcgacctcgatacgcttctggagcgggcc
ggcgagatcaagcagcccaagcgccgcgagacgctgatcaacttcgccgaccagatccgc
ctgtcgcgggcgctggtgaagctggattgcgacaccccgctgcccgagccgctggacgac
ctgaaggtgcgcgagccggacaaggaggtgctggccgccttccttgaccagatggagttc
cgctcgctggcgcgccgggttggcgacggctcggccgccgccgtcccaggctcgctcgac
cgtcccgccgcgccgcccaaggcgccggtctcgaccgtgtcctacatgggcgcggccgcc
cgcgcggcggctcagcccgtcgccgagccggtgacgatcgatcacgcggcctatgcctgc
gtgcgcgatctcgagacattgcgggcctgggtcgacaaggccaccgccaagggcgtggtg
gcgttcgacaccgagaccgacgcgttgtcgtcggccaccgccggcctgtgcggcgtctcc
ctggccatcgcgccgggcgaggcctgctacatcccggtcggccactgcgagaaggaaggc
ctggcgctcgaagccgccgccgacctcgtccagatcccgctggccgacgtgatcgcgacg
ctgaagccgctgctggaggacccggcggtgctgaaggtggcgcagaacgccaagtacgac
atcgccgtcctggcccggcacgggatccaggtgtcccccatcgaagacaccatgctgatc
agctacgtgctggaggcggggctgcatggccacggcatggacgagctgtcggagctgtgg
ctgggccacaagccgatcccgttcaagcaggtggccggcacgggcaaggcgcagatcagc
ttcaagcacgtggcgctctccgaagcgaccgcctacgccgccgaggacgccgacgtcacc
ttgcggctctacgagactctcaagccgcgcctggcgcgcgagggtctgctgaccgtctac
gaaacgctcgagcgtccgatgccggccgtgctggcggcgatggagaacgacggcatcaag
gtcgatccggaagccctgcgccggctctccaacgagttctcgctgcgcatggccgagttc
gaggcgcgcgccaccgagctggtcggccggccgttcaatctgggcagtcccaagcagatc
ggcgacgtgctgttcggcgagatgcagatcaagggcggcaagaagacggccaccggccaa
tggtccaccgacagcgacgtgctggagagcctggcgctggagcacgagctgccgcgcgtg
ctgctggactggcgccaactgtcgaagctgaagggcacctataccgagaacctggtggcg
gcgatcgccgagcgcacgggacgggtgcatacctcctacgccctggcggcgaccacgacg
gggcggctgtcgtcgtccgatccgaacctgcagaacatcccggtccgcaccgaggaaggc
cgcaagatccgcaaggccttcatcgcgccgcagggcaaggtgttgatcagcgccgactac
agccagatcgagctgcgcctcctggcccatatcggcgacatcccgcagctgaagcgggcg
ttccaggaaggcctcgacatccacgccatgacggcctcggagatgttcgacacgccgatc
gagggcatggatccgatgatccgccgccgggccaaagccatcaacttcggcatcgtctac
ggcatcagcgcctttggcctggccaaccagcttggcatcccgcagggcgaggccggggcc
tatatcaagacctatttcgagcgcttcccgggcatccaggcctatatggatgcgaccaag
gccttcgtgcgcgagcacggctacgtcacgaccattttcggccggaagatcaacatcccg
gagatccaggccaagtccgtggggcagcggcagttcgccgagcgggcggccatcaacgcg
ccgatccagggcgcggcggcggacgtcatgcggcgggcgatgatccgcatgcccgaggcg
cttcaggccgcgggcctgtcggcccgcatgctcctgcaggtgcacgacgaactggtcttc
gaggcgcccgaggccgaggccgagacggcccgtggggtcatcgccaatgtgatggaaaaa
gcggcagaaccggccgtcgctctgtccgtgccgctgacggtcgaagtgcgcgccgcgcac
aactgggacgaggcgcactag
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