Caulobacter segnis: Cseg_0741
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Entry
Cseg_0741 CDS
T01221
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
cse
Caulobacter segnis
Pathway
cse03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cse00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Cseg_0741
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cse03021
]
Cseg_0741
03400 DNA repair and recombination proteins [BR:
cse03400
]
Cseg_0741
Enzymes [BR:
cse01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Cseg_0741
Transcription machinery [BR:
cse03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Cseg_0741
DNA repair and recombination proteins [BR:
cse03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Cseg_0741
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
Motif
Other DBs
NCBI-ProteinID:
ADG09248
UniProt:
D5VHZ5
LinkDB
All DBs
Position
773483..777553
Genome browser
AA seq
1356 aa
AA seq
DB search
MAQSFTGKKRIRKSFGRIPEAVQMPNLIEVQRSSYEQFLQREVRPGQRRDEGVEAVFKSV
FPIKDFNERAVLEYVSYEFEEPKYDVEECIQRDMTFAAPLKVKLRLIVFETEEETGARSV
KDIKEQDVYMGDIPLMTDKGTFIVNGTERVIVSQMHRSPGVFFDHDKGKTHASGKLLFAA
RVIPYRGSWLDFEFDAKDIVYVRIDRRRKLPATTFLYALGMDGEEILTTFYDVVPFEKRA
GGWATPYKPERWRGVKPEFPLVDADTGEEVAPAGTKITARQAKKFADGGLKTLLLAPEAL
TGRYLARDAVNVGTGEIYAEAGDELDVPTIQALADQGFSTIDVLDIDHVTVGAYMRNTLR
VDKNAIREDALFDIYRVMRPGEPPTVEAAEAMFKSLFFDSERYDLSSVGRVKMNMRLEQD
VSDEVRILRKEDVLAVLKVLVGLRDGRGEIDDIDNLGNRRVRSVGELLENQYRVGLLRME
RAIKERMSSVDIDTVMPHDLINAKPAAAAVREFFGSSQLSQFMDQTNPLSEITHKRRLSA
LGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATHARVNKYGFIESPYR
RVKDGKPLDEVVYMSAMEESKHVIAQSNIKVDAGEIVEDLVPGRINGEPTLLQKETVDLM
DVSPRQVVSVAAALIPFLENDDANRALMGSNMQRQAVPLVQSDAPLVGTGMEAVVARDSG
AVVIAKRTGVVEQIDGTRIVIRATEETDAARSGVDIYRMSKFQRSNQSTCINQRPLVKVG
DKIVAGDIIADGPSTELGELALGRNALVAFMPWNGYNFEDSILISERIVRDDVFTSIHIE
EFEVMARDTKLGPEEITRDIPNVGEEALRNLDEAGIVAIGAEVQPGDILVGKVTPKGESP
MTPEEKLLRAIFGEKASDVRDTSLRLPPGVAGTIVDVRVFNRHGVDKDERALAIERAEID
RLGKDRDDEFAILNRNISGRLRELLIGNVALSGPKGLSRGEITADALSQIQPGLWWQIAL
EDEKAMGELESLRRLFDENRKRLDRRFEDKVDKLQRGDELPPGVMKMVKVFVAVKRKLQP
GDKMAGRHGNKGVISRILPIEDMPFLADGTHVDVVLNPLGVPSRMNVGQIFETHLGWACA
NLGKQITNLMEDWQAGGQKQALIDRLRDIYGPDEELPETEEELIELAKNLGKGVPIATPV
FDGARMSDIEDHLEMAGVNKSGQSILYDGLTGEQFKRPVTVGYIYMLKLHHLVDDKIHAR
SIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVAGRTKVYE
SIVRGDDTFEAGIPESFNVLVKEMRSLGLNVELENS
NT seq
4071 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaatccttcaccggcaagaagcggatccggaagtcgttcggccgcattcccgag
gctgtgcagatgccgaacctcatcgaggttcagcgctcctcctacgagcagttccttcag
cgcgaggtccgtccgggccaacgccgcgacgagggcgtcgaggcggtcttcaagtcggtg
ttcccgatcaaggacttcaacgaacgcgccgtcctggaatacgtttcgtacgagttcgaa
gagcccaagtacgacgtcgaggaatgcatccagcgcgacatgaccttcgccgcgccgctg
aaggtcaagctgcgcctgatcgtctttgaaaccgaagaagaaaccggcgcccgctcggtc
aaggacatcaaggagcaggacgtctacatgggcgacatcccgctcatgacggacaagggc
accttcatcgtcaacggcaccgagcgcgtcatcgtctcgcagatgcaccgctcgccgggc
gtgttcttcgaccacgacaagggcaagacccacgcctcgggcaagctgctgttcgccgcc
cgcgtgatcccgtaccgcggctcgtggctggacttcgagttcgacgccaaggacatcgtc
tacgtccgcatcgaccgccgccgtaagctgccggccacgaccttcctctatgccctgggc
atggacggcgaagagatcctgaccacgttctacgacgtcgtcccgttcgaaaagcgcgcg
ggcggctgggccaccccgtacaagcccgagcgctggcgcggcgtgaagccggagttcccg
ctggtcgacgccgacaccggcgaggaagtcgctccggccggcaccaagatcaccgctcgc
caggccaagaagttcgccgacggcggcctgaagaccctgctgctggcgccggaagccctg
acgggccgctacctggcccgcgacgcggtcaatgtcggcaccggcgagatctacgccgaa
gccggcgacgagctggacgtcccgacgatccaggccctggccgatcaaggcttcagcacc
atcgacgtgctggacatcgaccacgtcacggtcggcgcctacatgcgcaacaccctgcgc
gtggacaagaacgccatccgcgaggacgcgctgttcgacatctatcgcgtcatgcgtccg
ggcgagccgccgacggtggaagccgccgaggcgatgttcaagtcgctgttcttcgactcc
gagcgctacgacctgtcgtcggtgggccgcgtgaagatgaacatgcgtctcgagcaggac
gtgtcggacgaagtccgcatcctgcgcaaggaagacgtcctggccgtgctgaaggtcctg
gtgggcctgcgcgacggtcgcggcgaaatcgacgacatcgacaacctgggcaaccgccgg
gtccgctcggtgggcgaactgctggaaaaccagtaccgcgtcggcctgctgcgcatggaa
cgcgccatcaaggaacgcatgtcgtccgtcgacatcgacaccgtgatgccgcacgacctg
atcaacgcgaagcccgccgccgccgccgttcgtgaattcttcggctcctcgcagctgtcg
cagttcatggaccagacgaacccgctgtcggaaatcacccacaagcgtcgtctgtcggcc
ctcggcccgggcggtctgacccgcgaacgcgccggcttcgaagtccgcgacgtgcacccg
acccactacggccggatctgcccgatcgagacgccggaaggtccgaacatcggtctgatc
aactcgctggccacgcacgcccgcgtgaacaagtacggcttcatcgagagcccgtaccgt
cgcgtgaaggacggcaagccgctggacgaagtcgtctacatgtcggcgatggaagagtcg
aagcacgtcatcgcccagtcgaacatcaaggtcgacgccggcgagatcgtggaagacctg
gttccgggccgcatcaacggcgaaccgaccctcctgcaaaaggagacggtggacctgatg
gacgtgtcgccgcgccaagtcgtgtcggtcgccgccgccctgatcccgttcctggaaaac
gacgacgccaaccgcgccctcatgggctcgaacatgcaacgtcaggccgtgccgctggtg
cagtccgacgccccgctggtcggcaccggcatggaagccgtcgtcgcccgtgactcgggc
gccgtcgtgatcgccaagcgcaccggcgtggtcgagcagatcgacggcacgcgtatcgtc
atccgcgccaccgaagaaactgacgcggcccgctcgggcgtcgacatctaccggatgtcg
aagttccagcgttcgaaccagtcgacctgcatcaaccagcgtccgctggtgaaggtgggc
gacaagatcgtcgccggcgacatcatcgccgacggtccgtcgacggagctgggcgaactg
gccctgggccgcaacgcgctcgtcgcgttcatgccctggaacggctacaacttcgaagac
tcgatcctgatctccgaacgcatcgtccgcgacgacgtcttcacctcgatccacatcgag
gaattcgaggtcatggcccgcgacacgaagctgggtccggaagaaatcacccgcgacatc
ccgaacgtcggcgaggaagccctgcgcaacctcgacgaagccggcatcgtggcgatcggc
gccgaagtccagccgggcgacatcctggtcggcaaggtcacgccgaagggcgaaagcccg
atgacgccggaagaaaagcttctgcgcgccatcttcggtgaaaaggcttcggacgtccgc
gacaccagcctgcgcctgcccccgggcgtcgccggcacgatcgtcgacgtgcgcgtcttc
aaccgtcacggcgtcgacaaggacgaacgcgccctggccatcgaacgcgccgagatcgac
cgtctgggcaaggaccgcgacgacgagttcgcgatcctgaaccgcaacatctcgggccgc
ctgcgcgaactgctgatcggcaacgtcgctctgtcgggccccaagggcctgtcgcgcggc
gagatcaccgccgacgcgctgtcgcagatccagccgggcctgtggtggcagatcgccctg
gaagacgaaaaggcgatgggcgaactggaaagcctgcgccgcctgttcgacgagaaccgc
aagcgcctcgaccgtcgtttcgaagacaaggtcgacaagctgcagcgcggcgacgaactg
cctccgggcgtgatgaagatggtcaaggtcttcgtggccgtgaagcgcaagcttcagccg
ggcgacaagatggccggccgtcacggcaacaagggcgtcatctcgcgcatcctgccgatc
gaggacatgccgttcctcgccgacggcacgcacgtcgacgtcgttctgaacccgctgggc
gtgccttcgcgcatgaacgtcggtcagatcttcgaaacccacctgggctgggcctgcgcc
aatctcggcaagcagatcaccaacctgatggaagactggcaggccggcggtcagaagcag
gcgctcatcgatcgcctgcgcgacatctacggtccggacgaagagctgccggaaaccgaa
gaagagctgatcgagctggccaagaacctgggcaagggcgttccgatcgccaccccggtg
ttcgacggcgcgcgcatgagcgacatcgaggaccacctcgaaatggccggcgtcaacaag
tcgggccagtcgatcctgtacgacggtctgaccggcgagcagttcaagcgtccggtcacg
gtcggctacatctacatgctgaagctgcaccacctggtcgacgacaagatccacgcccgt
tcgatcggtccgtactcgctcgtcacgcaacagccgctgggtggtaaggcccagttcggc
ggtcagcgcttcggggaaatggaagtgtgggctctggaagcctacggcgcggcctacacc
ctgcaggaaatgctgacggtgaagtccgacgacgtggccggccggaccaaggtctacgag
tcgatcgtccgcggcgacgacacgttcgaagccggtatcccggaaagcttcaacgtgctg
gtcaaggaaatgcgctcgctcggcctgaacgtcgagctggagaacagctga
DBGET
integrated database retrieval system
