Caulobacter segnis: Cseg_2940
Help
Entry
Cseg_2940 CDS
T01221
Name
(GenBank) alpha amylase catalytic region
Organism
cse
Caulobacter segnis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
Malt_amylase_C
DUF3459
Motif
Other DBs
NCBI-ProteinID:
ADG11384
UniProt:
D5VLL1
LinkDB
All DBs
Position
complement(3196007..3197806)
Genome browser
AA seq
599 aa
AA seq
DB search
MSVMTPWRRTLLAVLGSSALAAAAIAAPSSYPQRKPQDEVIYFLLPDRFENGDRGNDHGG
PDRGPLVDGFDPTRAGFYHGGDLKGVTRRLDYIQGLGATAIWLAPIFKNKAVQGAPGRES
AAHHGYWITDFTDVDPHFGTKADFKALVDAAHARGLKVYMDIVVNHTADVIQYRECPEGH
CAYRGVADYPYARKGGVAGPTINEGFDGEDFGKLERPDWAYTPFVPAGQEAAKAPAWLND
PIYYHNRGESTFAGESSLLGDFATLDDVFTENPRVVAGFIEVYGRWIDDFGIDGFRIDTA
RHVNPEFWRAFVPAMLARAKAKGIPNFHIFGEVFDPDVAILASHTRVDKLPAVLDFAFQA
AVTNVVTGKAGPERLARVFAGDPVYEGGEATARQLPTFLGNHDMGRIGWFVQKARPGIRD
DELLARVTLANAVLLTARGVPTIYYGDEQGFTGDGDYADSREDMFPSRVASYNDNRLIGV
SAKGARSAFDPDSALYRQIAELARIRAATPALRDGRQVTRVADQQPGLFAFSRLLAGTEV
LAVFNTSDEPIKANVPVEARSASWRALRGACQSSAAAPDGYSVELAPLDYMLCVSEGRP
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtcatgacgccttggcgacgaacgctgctggccgtgctgggctcaagcgcgctg
gccgcggcggcgatcgcggccccatcgtcctatccccagcgcaagccgcaggacgaggtg
atctactttctgctgcccgaccgcttcgaaaacggcgaccgggggaatgaccacggcggg
ccggatcgggggcctctggtcgatggctttgatccgacgcgcgccggcttctatcacggc
ggagacctgaagggcgtgacccggcggctggactacatccagggcctgggcgcgacggcg
atctggctggcgccgatcttcaagaacaaggcggtgcagggcgcgcccggccgcgagtcg
gcggcgcatcacggctactggatcaccgacttcaccgacgtcgatccgcatttcgggacc
aaggccgacttcaaggccctggtcgacgccgcccacgcgcggggcctgaaggtctatatg
gacatcgtcgtgaaccacacggccgacgtcatccagtaccgcgagtgccccgaggggcat
tgcgcctatcgcggcgtcgccgactatccctacgcgcgcaagggcggcgtggcggggccg
acgatcaacgagggcttcgatggcgaggacttcggcaagctggagcggccggactgggcc
tatacgcccttcgttcccgcggggcaggaggccgccaaggcgcccgcctggctgaacgac
ccgatctactaccataaccgtggcgagagcacgttcgccggcgagagctcgctgctgggc
gatttcgccacgctggacgatgtcttcaccgagaacccgcgcgtcgtggcgggcttcatc
gaggtctacggccggtggatcgacgacttcgggatcgacggcttccgcatcgacaccgcc
cgccacgtgaacccggaattctggcgagccttcgtgcccgccatgcttgcgcgcgccaag
gccaaggggattccgaacttccacatcttcggcgaggtcttcgatcccgacgtggcgatc
ctggccagccatacgcgggtcgacaagctgccggcggtgctggacttcgccttccaggcg
gcggtgaccaacgtcgtcaccggcaaggccgggccggagcggctggcgcgggtcttcgcc
ggggatcccgtctacgaaggcggcgaggcgaccgcgcgccagttgccgaccttcctgggt
aaccacgacatgggccgcatcggctggttcgttcagaaggcgcggcccgggatccgcgat
gacgaactgctggctcgcgtgaccctggccaacgccgtcctgctgaccgcgcgcggcgtc
ccgacgatctactatggcgacgagcagggcttcaccggcgacggcgactacgccgactcc
cgcgaggacatgttcccgagccgggtcgccagctacaacgacaaccgcctgatcggggtg
tcggccaagggcgcccggtcggcgttcgatcccgacagcgcgctctaccgacagatcgcc
gagctggcgcggatccgggccgcgacgccggccttgcgagacggccgccaggtgacgcgc
gtcgccgaccagcagccgggcctcttcgcgttctcgcggctgctggccgggaccgaggtt
ctggctgtcttcaacacgagcgacgagccgatcaaggccaacgtgccggtcgaggcccgt
tcggcgtcgtggcgcgccctgcgcggcgcctgccagtccagcgccgccgcgccagacggc
tattccgtcgagcttgcgccgctcgactacatgctatgcgtttccgagggacgaccgtga
DBGET
integrated database retrieval system
