Caulobacter segnis: Cseg_3110
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Entry
Cseg_3110 CDS
T01221
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cse
Caulobacter segnis
Brite
KEGG Orthology (KO) [BR:
cse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cse03032
]
Cseg_3110
03400 DNA repair and recombination proteins [BR:
cse03400
]
Cseg_3110
Enzymes [BR:
cse01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Cseg_3110
DNA replication proteins [BR:
cse03032
]
Prokaryotic type
DNA Topoisomerases
Cseg_3110
DNA repair and recombination proteins [BR:
cse03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Cseg_3110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
ADG11550
UniProt:
D5VM27
LinkDB
All DBs
Position
3394253..3395284
Genome browser
AA seq
343 aa
AA seq
DB search
MPRDTIELQPETAGLTYVNDDDPGIRRVAAGDGFAFRDPDGRAVKDSETLDRIRALAIPP
AWTDVWICPSARGHIQATGRDQKGRKQYRYHDAWRRDRDGLKFSRMIAFGRALPRLRARV
EADMARRGLPREKVIAAVIRLMELTLIRVGNEEYAQANKSFGLTTLRDRHAKLSSMGGVF
EFRGKSGKVHKTGFRDRRLARIVKACQDVPGQRLFQYLDEDGQRRSIESADVNAYIRAAI
GEDFSAKDFRTWAGTLAAARGLCMVPRAGSATEAKRNVNTCVKAVAGLLGNTAAVCRGSY
IHPLVLEAYQQGVLPLKPGRSERAFELAVIRFLEAAKASCQVD
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgccacgcgacacgatcgagcttcagccggagacggccggtctcacctacgtcaatgac
gatgaccctggcataaggcgcgtggcggccggcgacggtttcgcctttcgcgatccagac
ggccgcgcggtcaaggattcggaaacgctggatcgcatccgcgccctggccatccccccg
gcctggacggacgtctggatctgcccctcggcgcgcggccacatccaagccaccggccgc
gaccagaagggccgcaagcagtaccgctatcacgacgcctggcgacgggaccgcgacggg
ctgaagttcagccgcatgatcgcctttggccgcgccctcccccgcctccgcgcccgggtc
gaggcggacatggcccgtcgcggcctgccgcgcgagaaggtgatcgccgcggtcatccgg
ctgatggagctgaccctgatccgggtcggcaacgaggagtacgcccaggccaacaagagc
tttggcctcaccacccttcgcgatcgccacgccaagctatcgagcatgggcggcgtcttc
gagttccggggcaagagcggcaaggttcacaagaccggcttccgcgaccgccgcctggcg
cgcatcgtcaaggcctgccaggacgtcccgggccagcgcctctttcagtatctcgacgag
gacggccaaaggcgctcgatcgaaagcgccgacgtcaacgcctatatccgcgccgccatc
ggcgaggacttctcggccaaggacttccgcacctgggccggcaccctcgccgccgcgcgc
ggcctttgcatggtcccgagggccggcagcgccaccgaggccaagcgcaacgtcaacacc
tgcgtgaaggccgtcgccggactgctgggcaacaccgccgccgtgtgccgaggctcgtac
atccatccgctggtgctggaggcctatcagcagggcgtgttgccgctgaagccgggccgc
tccgagcgcgccttcgagctggcggtgatccgcttcctggaggcggccaaggcctcgtgc
caagtcgactag
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