Caulobacter segnis: Cseg_3999
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Entry
Cseg_3999 CDS
T01221
Name
(GenBank) DNA replication and repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
cse
Caulobacter segnis
Pathway
cse03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Cseg_3999
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cse03400
]
Cseg_3999
DNA repair and recombination proteins [BR:
cse03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Cseg_3999
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_23
AAA_15
ABC_tran
AAA_29
SbcC_Walker_B
AAA_16
AFG1_ATPase
DUF6191
Motif
Other DBs
NCBI-ProteinID:
ADG12414
UniProt:
D5VPJ1
LinkDB
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Position
complement(4396595..4397758)
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AA seq
387 aa
AA seq
DB search
MASAALLSLTLTDFRSYERARLETSGRSVYLFGPNGAGKTNLLEAISLLTPGKGLRGANL
AEVGRRLPGEATGRPWAVAAEVESGPDAPVRIGTGVEQGGASRRTVRLDGETVSPGRLAD
HVRPIWLTPAQDRLFLEAASERRRFFDRLVFAGEPQHAANANAYDKAQRERMRLLIEAVE
RGAPPDATWLNALEARLAESGALMAQARARTLQALQAEIDGRGDRPFPQARLTLTGDWEK
LALEGVPFAEIEEKLAAALLSARARDGAAGRALTGPHRGDLAIFHVEKDRPAAECSTGEQ
KALILNLVLAQAARLSRAESAPNPVILLDEVAAHLDLARRAALADELTALKLQAFLTGTD
ESLFDHLKGRALGVRVCDAGLTTLEDE
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggccgctttgctttccctgacactgaccgacttccgctcctacgagcgcgcg
cgactcgagacgagcgggcgcagcgtctatctgttcggccctaacggcgctgggaagacc
aacctgctggaagccatcagccttctgacgcccggcaaggggctgcgaggcgccaacctc
gccgaggttggacgaaggcttcccggcgaggcgactggccgaccatgggctgtcgcggcg
gaggtcgagagcggccccgacgcgcccgttcggatcggaacgggcgtcgagcagggcggc
gccagccgtcggacggttcgcctcgacggtgaaaccgtctcaccgggccgcttggccgat
cacgtccggccaatctggctcacccccgcccaggatcgccttttcctggaagcggcgtcg
gagcgccggcgtttctttgaccggctcgtcttcgccggcgagcctcagcatgcggcgaac
gccaacgcctatgacaaggcccaacgcgaacggatgcgtcttctgatcgaggcggtcgaa
cgcggagcgccacccgatgcgacttggctcaacgcattggaggcgaggctggccgagagc
ggcgcgctgatggcgcaagcccgggctcgcacgctccaggccttgcaggccgagatcgat
ggacgcggcgatcgtcctttcccccaggcgcgcctgaccttgaccggcgattgggaaaag
ctcgcgctggaaggcgttcccttcgctgaaatagaagagaagctcgccgctgcgctcctg
tccgccagggcaagagatggcgccgccggacgggccctgacgggtccgcaccggggcgat
ctggccatcttccatgtcgagaaagaccggcccgcggccgaatgctcgactggggagcag
aaagcgctgattttgaacctcgttttggcccaggccgcgcgactttcgcgtgcggaatcc
gcgccgaatcctgtaatattgctcgacgaagtcgccgcgcatctcgatcttgcgagacga
gccgcattggccgacgaactcacggcgctcaagctccaggccttcctcaccggcacggac
gagtcgctgttcgaccatctcaagggtcgggcgctaggtgttcgcgtgtgcgacgccggc
ctgactactctggaagacgaatga
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