Caulobacter segnis: Cseg_4220
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Entry
Cseg_4220 CDS
T01221
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cse
Caulobacter segnis
Pathway
cse03030
DNA replication
cse03430
Mismatch repair
cse03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Cseg_4220
03430 Mismatch repair
Cseg_4220
03440 Homologous recombination
Cseg_4220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cse03032
]
Cseg_4220
03400 DNA repair and recombination proteins [BR:
cse03400
]
Cseg_4220
Enzymes [BR:
cse01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Cseg_4220
DNA replication proteins [BR:
cse03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Cseg_4220
DNA repair and recombination proteins [BR:
cse03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Cseg_4220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNApol_Exo
Motif
Other DBs
NCBI-ProteinID:
ADG12627
UniProt:
D5VQ54
LinkDB
All DBs
Position
complement(4611878..4612591)
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AA seq
237 aa
AA seq
DB search
MAREIILDTETTGFDPKTGDRLVEIGCIEVVDFMPTGRSFHEYCDPLRDMPAEAEKVHGL
SSAFLTGKPKFHEIADRFVEFVGDSVVVAHNAAFDRQFVNFELEKCGRAPIREDRWVDTL
AMAKKRFPGMYNSLDALCKRFKISLESRDKHGALIDAHLLAEVYLELQGGKERALELTHV
VETLAVSAAIQGSYGSRPRPLAPRSTDAEREVHAAWVRKNLKDQALWIKFGVVAAEG
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcgagatcatcctcgacaccgaaacgaccggcttcgatcccaagacgggcgat
cgcctggttgaaatcggctgtatcgaggtggtcgacttcatgccgaccggccgctcgttc
cacgaatattgcgacccgctgcgggacatgccggccgaggccgagaaggtccacggcctc
tcgagcgccttcctgaccggcaagcccaagttccacgagatcgccgaccgcttcgtcgag
ttcgtcggcgacagcgtcgtcgtggcccacaacgccgccttcgaccgtcagttcgtcaat
ttcgagcttgagaagtgcggccgcgccccgatccgcgaggatcgctgggtcgacaccctg
gccatggccaagaagcgctttccgggcatgtacaactcgctcgacgcgctgtgcaaacgc
ttcaagatcagcctggaaagccgcgacaagcacggcgccctgatcgacgcccacctgttg
gccgaggtctatctcgagctgcagggcggcaaggagcgcgctctcgagctgacccacgtg
gtcgagacccttgctgtttccgccgcgatccaaggctcgtacgggtcacgcccccggccg
ctcgccccccgctccaccgacgccgagcgcgaagtccacgccgcctgggttcgcaagaac
ctcaaggaccaggccctctggatcaagttcggggtggtcgcggccgagggttga
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