Cryptotermes secundus (drywood termite): 111861868
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Entry
111861868 CDS
T07421
Name
(RefSeq) 3'-5' RNA helicase YTHDC2 isoform X1
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
csec
Cryptotermes secundus (drywood termite)
Brite
KEGG Orthology (KO) [BR:
csec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csec03041
]
111861868
Enzymes [BR:
csec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
111861868
Spliceosome [BR:
csec03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
111861868
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YTH
HA2_C
OB_NTP_bind
R3H
Helicase_C
Ank_2
DEAD
HA2_N
Ank
nSTAND3
AAA_19
ATPase
Ank_5
AAA_22
AAA_23
PhoH
Ank_3
UvrD-helicase
NPHP3_N
YfbR-like
TsaE
SRP54
AAA_30
Motif
Other DBs
NCBI-GeneID:
111861868
NCBI-ProteinID:
XP_023702560
LinkDB
All DBs
Position
Unknown
AA seq
1448 aa
AA seq
DB search
MPKKKQNKKPEGGIGEEVRIAVNLWLQKFLRTEESKEFEFPSSLTSDERAYIHLLAKNLG
LCSKSRGKGANRYVTVYKREGSSIVQADAVFQLARSSRQHMYALLLKFPLTNKERQELLP
LTERDRMLNTEVKDVNKVMGPLGISVPHVPHGAVNQELLPFRQALPIWSVREEIMNLINS
NQVVVISGDTGSGKTTQVPQFILEHCQSAGKACRIICTQPHRISAVSVSERVAAERNEKI
GHSVGYQIRLECRVSPKTLLTYCTGGVLLRTLMGGDSVLATVTHILVDEVHERNCFTDFL
LIALRDSLAKFRSLRLILMSATIDTLTFTRYFNNCPVITVPGRQYDVQEYFLEDILKRTK
YMSKKMQKLKAEAESKKEQRLKLEKWTKYVIDGVHQEQDCRSERRSIPVPILGQQNEHPL
PEKTELETWLVEEMDHCLSKAWLSGSEDTFTQLLHLILSENVSVDYQHSQTSATPLMVAA
GRGFLNTVEQLLSLGANLNIRASNEWTALDWARAMKQNDIIELIEAYMNTELSNCPELLP
SHDDPELGEDEKELLDIYHHSFNDENIDMDLLMALLCDIHTSQDKGAILVFLSGYDDIMN
VRERITAEDKKLTEASKYALYTLHSNMQTGDQKHVFRPPPPGVRKIILSTNIAETSVTID
DVVFVIDLGKVKEKSYDAMSGICMLRPVWISQACSQQRKGRAGRTRPGICYHMFSRIRYK
AMQKYHTPEILRMPLQELCLHTKLLAPANTPIADFLARAIDPPSSLVTRNAVQLLKTIDA
LDSWEDLTELGHRVLDLPVEPRLGKMLLYSVVLKCLDPVLTIVCCLAYRDPFILPAQPSQ
KRACFLSRKKLAAGTYSDHMALLRAFQAWQRARSDGWERVFCEKNFISAATMEMVVGMRM
QLLGQLRASGFVRVRGSGDIRDLNNNSDNWAVVKAALCAGMYPNLLRVDREHLQLRALKE
FKVTFHPSSTLHDCPKSARTSVAASHSATVEGLPSDWLIYEEISRSGRFCHARCCTLVTP
ITVALFAGPARMPLDAVSEAESEHVFRGEGGIETESDSEAEEIPDGQNTTLKLDEWVVFR
VDAEAAHLALQLRQKWHSLFLRRMRAPAKPWSQVDEAVIKTVVNVLTAEEEAVGLQQPSG
IGRRPWPLSVNYNVHGSRASTEEVETQEESILGGAESRTGFRQQKKFEYAPKVTSDHGER
SDTGSIRSFGSGNMSETPSPTPSHGSAGDNTTLASSPTAGGGPVTSRYFIIKAGNFKTIE
ASLSRGVWAFTPNTERKMIRVFKEGKRVVLVFSVQGSGHFQGYAHLSADKPDSTTGTADQ
CFELSGPNLSPPLPIEWIKRANIPFQATRHLLNPYNENKRVQTSRDGQEIEPSIGEALCN
LWDKIPPFVPKSTFFGSLKTSQDMPETAAPSKNMGYYGRPIRGYSYLGCGPGYQHYNMNY
GHRGQHPK
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagaaaaaacagaacaagaaacccgaaggaggaattggagaagaagttcgtatt
gctgtcaatctatggttacagaaatttttacgtacagaagaaagtaaagaatttgaattt
ccctcttccctgacttctgatgaacgtgcttacatccacctgctggctaaaaatttgggt
ctgtgttcaaagagcagaggcaagggagcaaataggtatgtaacagtatacaagcgagag
ggctcaagtattgtacaagcagacgcagtgttccagcttgcgcggtcatctcggcagcat
atgtatgcattgctactcaaatttccactcacaaataaagagcgacaagaactgttgcct
cttactgagagagaccgaatgctgaatactgaagtgaaggatgtgaataaagtcatgggt
cctttgggcattagtgttccccatgtgccacatggagcagtaaaccaggaattgctccca
ttcagacaagcgttacccatttggtcagtgagagaagagattatgaacttaatcaacagc
aaccaagttgtggttatcagcggtgacacgggatctggaaagacaacacaggtcccacag
tttattctcgagcactgtcagagtgcaggcaaggcttgtcgtattatttgcacacaacca
catcgcatttcggctgtttctgtaagtgaacgagttgctgcagaacggaatgaaaaaatt
ggacactctgttggttaccaaataagactagaatgcagagtatctccgaaaacacttctg
acttactgtaccggtggtgttctgcttcggactttgatgggaggagattcagttcttgct
actgtaacgcatatcctggttgatgaagttcatgaaaggaattgtttcacagacttcctt
ctgattgcattacgagattctttggccaagtttcggtcattgcgcctgatcctcatgtct
gccacgatcgacacacttaccttcaccagatacttcaacaactgtcctgtcataacagtt
cctgggcgacagtatgatgttcaggaatatttcttggaagacatattgaaaaggaccaaa
tacatgagcaaaaaaatgcagaaacttaaggcagaggctgagagtaagaaagaacaacga
ttaaagcttgagaagtggaccaagtatgtgattgatggtgtacatcaggaacaagattgt
agaagtgaacgtagatccattccagtaccaatcttgggtcagcagaatgagcacccttta
cctgagaaaacagaactagaaacatggcttgtcgaggagatggatcactgtttgtccaaa
gcgtggttgtcgggctcagaagatactttcacacagctcttacacctcattctctctgaa
aatgtttctgttgattatcagcattcccagacatcagcaactcctctaatggtggcagca
ggcagaggcttcctgaatacagtggagcagctgctcagtcttggtgcaaaccttaatatt
cgggcatccaacgaatggaccgcactggactgggctcgtgccatgaagcagaatgatatt
attgagcttatagaagcatacatgaacacagaattaagtaattgcccagaattactgcca
tcacatgacgatccagagctaggggaggatgagaaggaactcctggacatttaccatcac
agtttcaatgatgaaaatattgacatggatctcttgatggccctcctctgtgacattcat
acttcacaggataaaggtgcaattcttgtattcttgtcgggatatgatgacatcatgaac
gtgagggagaggatcacagctgaggacaagaaattgacagaggcttccaagtacgctctc
tacactttacactcaaatatgcagactggcgaccagaagcacgttttccgtcctccgccg
ccaggtgtccgtaagattatcctatctacaaacattgctgaaaccagtgtcaccatagat
gatgtggtgtttgttatagatttgggcaaggtaaaggagaaatcgtacgatgccatgtca
ggcatttgcatgttacgcccagtgtggatctcccaggcatgttctcagcagcgaaagggt
cgagcaggtcgtacacgtccaggcatttgttatcacatgttctccagaataagatacaaa
gctatgcagaagtaccacacaccagagatccttagaatgccattacaggaactgtgcctg
catacaaaacttctggcacctgcaaacacgccaatcgctgacttcctggcacgagccatt
gatccgccatcatctcttgtcacaaggaatgcggtacagctgctaaagacgattgatgcg
ttggattcgtgggaggacctgacggaacttggccaccgtgtgctggatctgccagttgaa
cctcgacttggcaagatgctattgtattctgtggtgctgaagtgcctggacccagtgctt
acaattgtctgctgcttagcatacagggatcctttcatcttgcctgcacaaccatcacaa
aagcgtgcttgcttcttgagcaggaagaaattagctgccggaacatacagtgaccatatg
gctttgctccgagcattccaggcctggcagcgtgcacgttcagatggctgggaacgtgta
ttctgtgagaagaatttcatttctgctgcaacgatggagatggtggtaggaatgaggatg
cagctgctagggcagttgcgagcttcgggatttgttcgagtccgaggtagcggtgacatt
cgtgatctgaacaacaattctgataactgggctgttgtgaaggctgccctatgtgctgga
atgtatccgaacctcctccgagtggatcgggaacatctccaactgagagcactgaaagaa
ttcaaagttacattccacccctcatcaaccttacatgactgccccaaatcagctcgtaca
tcagtggctgcatcacattcagcaacggtggagggtcttccatcagactggctcatttat
gaagagattagccgctcggggcgattctgtcatgctcgctgctgcactctggtcacgcct
attacagttgctctctttgctggaccagcacgaatgccactggatgctgtgtcagaagca
gaaagtgagcatgtgttccgaggagagggtggcatagagactgagagtgacagtgaagca
gaggaaataccagatggacaaaacacgactcttaaacttgacgaatgggttgtgttccgt
gttgatgccgaagctgcacacttagcactgcaactcagacagaagtggcattcattgttc
ttgcgccgcatgagggctcctgctaagccttggtctcaggtggatgaagcagtgataaag
acagtcgttaatgtgctgactgcagaggaggaagcagtgggtttacagcagccatcagga
atcggccggcgtccatggccgttgagcgtcaactataatgtacatggatccagggcatcc
acggaagaagtggaaacacaagaggagagcatcttgggcggtgctgaaagcagaactggc
ttcaggcagcaaaagaaatttgaatatgcaccaaaagtgacctctgatcatggtgaacgt
tcagatacagggagcatcagatcgtttggcagtggaaacatgagtgaaaccccatctcct
acgccatcccacggaagtgctggggataacacgacattggctagcagccccactgcaggg
ggagggccagttacttcacgctacttcatcattaaagcaggcaatttcaagaccatcgag
gcttctcttagtcgtggtgtttgggcatttactcccaatacagaaagaaaaatgatacgt
gtattcaaggaaggcaagcgggtggtactggtgttcagtgtgcaaggcagtggacacttt
caaggatatgcacatctgagtgcagataagccagactccacaacaggtacagcagaccag
tgctttgaactgagtggtcctaacctcagtccgccactccctattgaatggattaagcga
gccaacatcccctttcaggcaactcgccatttactgaatccgtacaacgagaacaaaaga
gttcagacaagtcgtgatggacaggagattgaacccagtataggcgaggcactatgtaat
ctatgggacaaaatacctccatttgtgccaaagtccactttctttggttcactcaagaca
tctcaagatatgcctgaaactgcagcaccatctaagaatatgggatattacggacgccca
atcagggggtattcgtacttgggatgtggcccaggttaccaacattataacatgaactat
ggtcaccgtggccaacatccaaagtaa
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integrated database retrieval system
