Cryptotermes secundus (drywood termite): 111861954
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Entry
111861954 CDS
T07421
Name
(RefSeq) putative U5 small nuclear ribonucleoprotein 200 kDa helicase
KO
K12854
pre-mRNA-splicing helicase BRR2 [EC:
5.6.2.6
]
Organism
csec
Cryptotermes secundus (drywood termite)
Pathway
csec03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csec00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111861954
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csec03041
]
111861954
Enzymes [BR:
csec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
111861954
Spliceosome [BR:
csec03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
111861954
Complex C
U5 SnRNP specific factors
111861954
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
SNRNP200_wHTH
DEAD
Helicase_PWI
ResIII
Helicase_C
BRR2_plug
AAA_30
AAA_22
DEXQc_Suv3
nSTAND3
SWI2_SNF2
AAA_11
Luteo_PO
Motif
Other DBs
NCBI-GeneID:
111861954
NCBI-ProteinID:
XP_023702714
LinkDB
All DBs
Position
Unknown
AA seq
2135 aa
AA seq
DB search
MADAAARQLQYEYKANSNLVLQADVRLIERRSRDEATGEVMSLVGKLDGTRMGDRHQRTR
PVKAAERKAKRQKRDEAQYDFTRMKGATLLSEGVDEMVGILYRPKTQETRQTYEVLLSFI
QEALGDQPRDILCGAADEVLAVLKNDRLKEREKKRETESLLGNLAEERFALLVNLGKKIT
DFGTEEKVTTTDENIDETYGINVQFEESEEEDDEDIYGEVREEEDEEEGEEAKLDGAIHA
ENLGGAEEMKKEKSLHPLDIDAYWLQRRLSKFYDDAMASQAKAAEVLSVLRDAGDDRDCE
NQLVLLLGYDCFDFIKLLKKHRHMILYCTLLASSQSESERQKIRDKMNEDSSLARILRQL
DTGKGEDDGGGEDGGIARASRRKEQADEGLDGARGQVPGSRQLLDLEDLTFAQGSHFMAN
KRCQLPDGSFRKQRKGYEEVHVPALKSKPFAPDESLYAIEKLPKYVQPAFEDFKTLNRIQ
SRLYKAALDSDENILLCAPTGAGKTNVALLCMLREIGKHINADGTINTDEFKIIYVAPMR
SLVQEMVGNFSKRLNSYNLTVSELTGDHQLTREQIQATQIIVCTPEKWDIITRKGGEKTY
TQLVRLIILDEVHLLHDERGPVLEALVARTIRNIETTQEDVRLVGLSATLPNYQDVSTFL
RIKQETGLFYFDNSFRPVALEQQYIGVTEKKAMKRFQVMNEIVYEKVMEHAGHNQVLVFV
HSRKETGKTARAIRDMCLEKDTLGQFLREGSASMEVLRTEAEQVKNHELKDLLPYGFAIH
HAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYNPEKGRWVELG
ALDVLQMLGRAGRPQYDTKGEGILITNHSELQYYLSLLNQQLPIESQCISKLPDMLNAEI
VLGTIQNVRDAVTWLGYTYLYVRLLRAPTLYGISHDRLKEDPLLEQYRADLIHTAALHLD
HSGLIKYDRKTGHFQVTELGRISSHYYCTHDTMATYNQLLKPTLSEIELFRVFSLSGEFR
NITVREEEKLELQKLMERVPIPIKESIEEPSAKVNVLLQAYISQLKLEGFALMSDMVYVT
QSAARLMRAIFEIVLYRGWAQLADKALSLCKMVDRRMWQSMSPLRQFRKMPEEIVKKIEK
KNFPWERLYDLNPNEIGELIRLPKLGKTIHKYVHQFPKLELSTHIQPITRSTLRIELTVT
PDFQWDEKLHGASEAFWILVEDVDSEVILHHEYFLLKSKYATDEHLIKFFVPVFEPLPPQ
YFLRIVSDRWLGAETQLPVSFRHLILPEKNLPPTELLDLQPLPVTALRNPEFESLYIDKF
PQFNPIQTQVFNAVYNSDDNIFIGAPTGSGKTTIAEFAVLRLLSQNPDGRCVYLVPRDAL
AEVVFADWQQKFGGVLGKKVVLLTGETGTDLKLLAKGQVIVCTAEKWDILSRRWKQRKNV
QNIQLFIVDELQLIGGEDGPVLEVVCSRMRYMSSQIERQIRIVSLSASLADARDVAQWLG
CNANATFNFHPSVRPIPLELHVQGFNVTHNASRLIAMTKPVYNSILKHSPHKPVIVFVPT
RKQARLTAIDLLTFTAAEGQPNRFFHAEEEDIKPFLDRMTDKTLKETLSQGVAYIHEGLT
PSDHRLVEQLFDSGAVQVAVVTRNLCWGVSIAAHLVVIMDTQFYNGKIHAYEDYPITDVL
QMVGRANRPLEDDDAKCVLMCQSSKKDFFKKFLNESLPVESHLDHRLHDHFNAEIVTKTI
ENKQDAVDYLTWTFIYRRLTQNPNYYNLQGVTHRHLSDHLSELVENTLNDLEQSKCISIE
EEIDCMPLNLGMIAAYYYINYTTIELFSLSLNNKTKIRGLLEIISSAAEYEDVPVRHHED
NLLRSLAARLPNKLAGSPKYNDPHIKTNLLLQAHLSRLQLGAELQGDTEAILGKAIRLIQ
ACVDVLSSSGWLSPAVAAMELAQMVTQAMWSKDSYLKQLPHFTPDIIKRCTEKGVETVFD
IMELEDDVRSKLLQLTDAQMADVARFCNRYPNIDMKYQVEDEDSIRSGSSVIVTVQLERE
DEVTGPVIAPFYPQKREEGWWVVIGDPKMNSLLSIKRLNLQQKSKVKLDFVAPSPGHHTY
TLYFMSDAYLGCDQEYKFSIRVEDYQSGESDSDSG
NT seq
6408 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgcagctgcgaggcagttgcaatatgagtataaagcgaattccaatcttgta
ctacaagcagatgttcgccttattgagcgacgtagtcgagatgaggcaacaggcgaggtt
atgtcccttgtggggaaactggacggtacccgaatgggtgataggcatcaaagaacacgt
ccagtaaaagcagcggaaagaaaggcgaaacgtcagaaacgagatgaagcccagtatgat
tttaccagaatgaaaggagccacactactatctgagggtgtagatgaaatggtgggcatc
ttgtatcgtcccaagacccaagagacccgtcaaacatatgaagttctgctcagttttatt
caggaggctttaggtgatcagcctcgtgacatcttgtgtggagctgcagatgaagttttg
gcggtgctgaagaatgatcgcctgaaggaacgggagaaaaaacgtgaaactgaatcattg
cttgggaacttggctgaagaaagatttgcacttcttgtgaatctggggaagaaaataact
gactttggcacagaagagaaagttacaacaacagacgaaaacattgatgaaacatatgga
atcaatgtacagtttgaagaatctgaagaggaagatgatgaagatatatatggagaagtg
agagaagaggaagatgaagaagaaggagaagaagcaaaattagatggtgcaattcatgca
gagaatttagggggagcagaggaaatgaagaaagaaaagtcacttcaccctttagatatt
gatgcatattggcttcagcgccggttgtcaaaattctatgatgatgcaatggcatcccaa
gcaaaagcagctgaggtcctttcagttcttagagatgccggagatgaccgggattgtgag
aaccagcttgttctgctgcttggttatgattgcttcgattttatcaaattactaaaaaag
cacaggcacatgatactctactgcactcttctggcctcatctcagagtgaatcagagcga
caaaagatacgagataaaatgaatgaagactcgtccctggctcgcattctaaggcagctg
gatactggaaagggtgaagatgatggtggaggggaggatggtggaatagcaagagcttct
cggcgcaaggaacaggcagatgaagggctagatggtgcacggggccaggttccaggatca
aggcagctgttggacttggaggatctcacatttgctcaaggttcacatttcatggctaac
aaacgctgccagctccctgatgggtcatttaggaagcagaggaagggttatgaagaagtt
catgtccctgcattgaagtcaaagccctttgcaccagatgaaagtttatatgctatagaa
aagttgccaaaatatgtgcagccagcgtttgaagacttcaagacattaaacagaattcag
agtagactgtataaggcagcacttgattcagatgaaaatattttactttgtgctcctact
ggagcaggtaaaacgaatgtggctcttctgtgcatgctccgagaaattggaaagcatatc
aatgctgatggcacaataaatacagatgaattcaagatcatttatgtggctcctatgaga
tctcttgtacaagaaatggtgggaaattttagcaagaggttaaattcttataatttgaca
gtgtcagagttgacaggtgatcatcagctgacaagggaacagatccaggctacacagata
attgtgtgtacaccagagaaatgggatattattacaagaaagggaggagagaaaacttat
acacaacttgtgcgactgatcatccttgatgaagttcatttacttcatgatgaaagagga
cctgtacttgaagctttggtagcacggacaatacgcaacattgaaaccacacaggaggat
gttcgacttgtgggtctcagtgccaccttgcccaattaccaagatgtatccacttttctg
aggattaaacaggagacaggcttgttctactttgacaacagttttcgtcctgttgcatta
gaacagcaatacattggagtgacagagaagaaagcaatgaaaagattccaagtgatgaac
gaaattgtgtatgaaaaagttatggagcatgcaggtcataaccaggtgcttgtgtttgtg
cattcacgtaaagaaacagggaaaactgctcgagcaattcgagacatgtgtcttgaaaag
gatactcttggccagttcttgagggaaggttcagcatccatggaagttctgagaactgag
gctgagcaagtgaagaatcatgaactgaaagatctcttaccgtatgggttcgccatccat
catgcaggtatgactcgagttgacagaacattggtagaagatctgtttgctgacaggcat
attcaggttctcgtgtctactgccaccttggcttggggtgtaaacttgccagcacacaca
gtcatcataaagggaacacaagtttacaaccccgagaaaggtcgttgggtagagttagga
gcactggatgtattgcagatgcttggtcgtgcaggtcgacctcagtatgataccaaagga
gagggtattctgatcacaaaccacagtgagctgcagtactatctgtcacttttgaaccaa
cagctgccaatagagtcgcagtgtattagcaagctaccagatatgctgaatgcagagatt
gtactggggactattcagaatgttagagatgctgttacatggctgggatacacttacctc
tatgtcagattgttgcgtgcacccaccctatatggaatatctcatgaccgtcttaaggaa
gatcctcttttggaacagtatagagctgacttaattcatactgcagccttgcatttggat
cacagtgggcttataaaatatgatcgcaagacaggacatttccaggtgacagaactgggc
cgcatttccagtcactactactgcacacatgacactatggcaacatataatcagcttctg
aaaccgaccctaagtgaaattgaactcttcagagtgttctcattatctggcgagttccgt
aacatcactgttagggaggaagagaagctggaactgcagaagctgatggagcgtgtgcca
attcccatcaaggagagcattgaagagccaagtgcaaaagtgaatgttttgcttcaggct
tacatctcacaattgaaacttgagggctttgctttgatgtcagacatggtttacgttaca
cagtctgctgctcgactcatgcgtgccatttttgaaattgttttgtaccgaggctgggcg
cagttggccgacaaagcattgtcactgtgtaaaatggtggatcgacgcatgtggcagtcc
atgtcacctcttcgccaattccgtaaaatgccagaagaaattgtgaagaaaattgaaaag
aagaattttccatgggagaggttgtatgatctaaatccaaatgaaattggagagctgatt
cgtttgcccaagttgggcaaaacaatccacaagtatgtacatcagtttccaaagcttgag
ttgtctacacacatccaacctataacaaggtcaacattgcgtattgaattgacagtcacg
cctgacttccagtgggatgaaaaattacatggggcatctgaagcattttggattttggtg
gaagatgtggactccgaagtgatcttgcatcatgaatattttcttctaaaatccaagtat
gcaacagatgaacatcttatcaagttctttgtaccagtttttgaaccacttcctccacag
tattttctgagaattgtgtcagatcgatggctcggtgcagagactcagctaccagtctcc
ttcagacatcttattctgccagaaaagaatctccctccaacagaacttttggatcttcag
ccccttccagtaacagctttgagaaatcctgagtttgaatctctatacatagataaattt
ccacagttcaatccaatccagacacaggtgttcaatgctgtctacaatagtgatgacaac
attttcataggagccccaactggctcaggaaagacaacaattgctgaatttgcagtactg
agacttctgtcacagaatcctgatggccgctgtgtataccttgtccctcgtgatgctcta
gcagaggtggtgtttgctgactggcaacagaagttcggtggtgtgctagggaagaaagtg
gtactcctgactggtgagactggaactgacttgaagttactggctaaaggacaggtaata
gtttgcactgctgagaaatgggacattctgtcaaggcggtggaaacaaaggaagaatgta
caaaacattcagctctttattgttgatgaactacagttgattggaggtgaagatggtcct
gtgttagaagtggtctgttctaggatgcgatacatgtcttcacaaattgaacgacagatc
cggatagtgtcactgtctgcttctctcgctgatgcccgtgatgttgcacagtggctgggc
tgcaatgccaatgctacatttaatttccatcctagtgttcgacctattccacttgagctg
cacgttcaaggtttcaatgtcacacataatgcatcccgtctcattgcaatgaccaaacca
gtgtacaattcaattctgaaacatagtccccacaagcctgtaattgtctttgtacctaca
cggaaacaagctcgactaactgcgatagatctcttgaccttcactgcagctgagggtcag
cccaatagattcttccatgctgaagaagaggacatcaagccattccttgaccgtatgaca
gataagacattgaaagagacactctcacagggagtggcttatatccatgaaggtcttaca
ccaagtgaccaccggcttgtagagcaattgtttgattcaggagctgtacaggtagcagtt
gtgacacgaaacctgtgctggggtgtcagcatagctgcacacttggtcgttatcatggat
acacagttttacaatggcaaaattcatgcatatgaggactatcccattactgatgttctg
cagatggtgggccgtgccaatcgtccactagaggatgatgatgcaaagtgtgtgctcatg
tgtcagagctctaaaaaggacttcttcaagaaattcctcaatgagtcattgccagttgag
agccatctggatcataggttgcacgatcatttcaatgcagagattgtgaccaaaaccatt
gagaacaagcaggatgcagtagattatctgacttggactttcatctaccgcaggctcaca
caaaacccaaattactataatcttcagggagttacccacaggcacttatctgatcatctt
tcagaacttgttgaaaatactctgaatgatctggaacaatcaaaatgcatcagtattgaa
gaagagattgactgtatgccattgaacctgggcatgattgcagcatattactacatcaac
tacaccacaattgagttgttcagtctgtcccttaataacaagacaaagattcgtgggttg
ctggaaatcatttcttctgctgcagaatatgaagatgtaccagtgcgccaccatgaagat
aatctgcttcgcagtttggcagcacggcttccaaacaagttggcaggatctcccaaatac
aatgacccacatatcaaaacaaatctgcttcttcaggcccatctgtctcgacttcagctg
ggggcagagctacagggagacacagaagccattcttggcaaggcaattcgcttgattcaa
gcttgtgtggatgtgctgagttccagtggttggctgtctcctgcagtagcagctatggaa
ttggctcagatggttacacaggctatgtggagtaaggattcatatctgaaacaacttcca
cacttcacacctgacatcatcaagaggtgcacagagaagggtgtggagacagtttttgat
ataatggaattagaggatgatgtccgttcaaaattgctacagctgactgatgcacagatg
gcagacgttgccaggttttgtaatcgttatcctaacattgacatgaaatatcaagtggag
gatgaggatagcatccgtagtggttcctctgtcattgttactgtgcaactggaacgtgag
gatgaagtcactggaccagtgattgctccattctatccacagaaacgagaggaaggatgg
tgggtagtgatcggtgatcccaagatgaactcattgctgtcaataaagagactcaattta
cagcagaaatccaaagttaagttagattttgttgctccaagtccagggcatcacacatac
actttgtatttcatgagtgatgcttatctcggttgtgatcaagaatacaagttttctata
cgtgtggaagattatcagtctggtgagagtgacagcgacagtggctaa
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integrated database retrieval system
